RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	ZDHHC24	Q6UX98	284 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LDHAL6A	Q6ZMR3	332 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RAB11FIP2	Q7L804	512 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SKAP1	Q86WV1	359 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ATG4A	Q8WYN0	398 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RUBCN	Q92622	972 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GLG1	Q92896	1179 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	R3HDM4	Q96D70	268 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	VPS50	Q96JG6	964 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MACROD1	Q9BQ69	325 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	VN1R3	Q9BXE9	311 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MAGEH1	Q9H213	219 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TP63	Q9H3D4	680 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CXorf36	Q9H7Y0	433 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SEPSECS	Q9HD40	501 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RXFP3	Q9NSD7	469 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SERTAD4	Q9NUC0	356 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SERGEF	Q9UGK8	458 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DTNA	Q9Y4J8	743 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	IQGAP1	P46940	1657 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CLIP1	P30622	1438 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FMN1	Q68DA7	1419 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	INO80	Q9ULG1	1556 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SPAG9	O60271	1321 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	MED14	O60244	1454 aa		4.18	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DEPDC5	O75140	1603 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CFAP65	Q6ZU64	1925 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ADGB	Q8N7X0	1667 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZSCAN9	O15535	394 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SH3BP5	O60239	455 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	JTB	O76095	146 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PDE8B	O95263	885 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SRGAP2B	P0DMP2	458 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ENG	P17813	658 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ABCG1	P45844	678 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ITGA8	P53708	1063 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SUMO2	P61956	95 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	AP2B1	P63010	937 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TFF2	Q03403	129 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TAF12	Q16514	161 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZKSCAN2	Q63HK3	967 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FCRLB	Q6BAA4	426 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GGT6	Q6P531	493 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NAPRT	Q6XQN6	538 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	IZUMO1	Q8IYV9	350 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LRRC71	Q8N4P6	559 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DNAJB14	Q8TBM8	379 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	HASPIN	Q8TF76	798 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TMEM171	Q8WVE6	324 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	XAGE5	Q8WWM1	108 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	OVCA2	Q8WZ82	227 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TBC1D5	Q92609	795 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	USP13	Q92995	863 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	RTKN	Q9BST9	563 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DPCD	Q9BVM2	203 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	DLL3	Q9NYJ7	618 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SH3BP4	Q9P0V3	963 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	KIF17	Q9P2E2	1029 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NPHP4	O75161	1426 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SYNM	O15061	1565 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	A2M	P01023	1474 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ARHGAP35	Q9NRY4	1499 aa		4.17	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZC3H13	Q5T200	1668 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	COL15A1	P39059	1388 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TNR	Q92752	1358 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754		A0A087WZ62	844 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CCDC196	A0A1B0GTZ2	297 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754		A1L4Q6	167 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	WIPF3	A6NGB9	483 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754		A8MVJ9	347 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754		H0YIZ8	118 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SMIM22	K7EJ46	135 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZNF213	O14771	459 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PIP5K1B	O14986	540 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LARGE1	O95461	756 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PRKCG	P05129	697 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CSF1R	P07333	972 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CST5	P28325	142 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	UQCRC1	P31930	480 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	EEFSEC	P57772	596 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GALNT1	Q10472	559 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PTCHD3	Q3KNS1	767 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TBRG1	Q3YBR2	411 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	AARS2	Q5JTZ9	985 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PCID2	Q5JVF3	399 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FBXO47	Q5MNV8	452 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NFRKB	Q6P4R8	1299 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	ABRA	Q8N0Z2	381 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FSTL5	Q8N475	847 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TEX19	Q8NA77	164 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	SPPL3	Q8TCT6	385 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	IPO4	Q8TEX9	1081 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	THAP4	Q8WY91	577 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	CPT1B	Q92523	772 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms