RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	PARP6	Q2NL67	630 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SPDYA	Q5MJ70	313 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	LGSN	Q5TDP6	509 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FOXB2	Q5VYV0	432 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RBM12B	Q8IXT5	1001 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.66	□□□□□ -0.22	3e-6	■■■■□ 20.4
CSNK1D-222	ENST00000584377	CRYBG2	Q8N1P7	616 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CCDC185	Q8N715	623 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	UCMA	Q8WVF2	138 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TRAPPC9	Q96Q05	1148 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NUDCD1	Q96RS6	583 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SRPK1	Q96SB4	655 aa	Known RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KCTD15	Q96SI1	283 aa	Predicted RBP	13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SNX25	Q9H3E2	840 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MTMR10	Q9NXD2	777 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MORF4L1	Q9UBU8	362 aa		13.66	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SMIM10L2A	P0DMW4	78 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SMIM10L2B	P0DMW5	78 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SCNN1A	P37088	669 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	RASSF2	P50749	326 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GRB14	Q14449	540 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	IQSEC1	Q6DN90	963 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	UNC5A	Q6ZN44	842 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ARC	Q7LC44	396 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CLNK	Q7Z7G1	428 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC2A14	Q8TDB8	520 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FAM136A	Q96C01	138 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MS4A4A	Q96JQ5	239 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PLEKHG4B	Q96PX9	1271 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KLK14	Q9P0G3	267 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	KANSL3	Q9P2N6	904 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC45A1	Q9Y2W3	748 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	NRCAM	Q92823	1304 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SMIM28	A0A1B0GU29	152 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PIR	O00625	290 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SPTLC1	O15269	473 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TOMM70	O94826	608 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CD4	P01730	458 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CYP2C9	P11712	490 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BGN	P21810	368 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	MAGEA3	P43357	314 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ACADSB	P45954	432 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SERPINB4	P48594	390 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF618	Q5T7W0	954 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	HEATR6	Q6AI08	1181 aa	Known RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	IRGC	Q6NXR0	463 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CDHR3	Q6ZTQ4	885 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF534	Q76KX8	674 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.65	□□□□□ -0.22	8e-9	■■■■□ 23.9
CSNK1D-222	ENST00000584377	TRIM56	Q9BRZ2	755 aa	Known RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SMYD2	Q9NRG4	433 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PIN4	Q9Y237	131 aa	Known RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PDLIM1	O00151	329 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DYNC1LI2	O43237	492 aa	Predicted RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	CREB3	O43889	395 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	GSTA2	P09210	222 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	TPSB2	P20231	275 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PRKD1	Q15139	912 aa	Predicted RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.65	□□□□□ -0.22	3e-6	■■□□□ 12.1
CSNK1D-222	ENST00000584377	TPSAB1	Q15661	275 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	BRI3BP	Q8WY22	251 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SIGLEC10	Q96LC7	697 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	ZNF560	Q96MR9	790 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	EBNA1BP2	Q99848	306 aa	Known RBP	13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DTL	Q9NZJ0	730 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	SCOC	Q9UIL1	159 aa		13.65	□□□□□ -0.22
CSNK1D-222	ENST00000584377	DCAF8L1	A6NGE4	600 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377		H0Y3Z8	333 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UGT1A9	O60656	530 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GOT1	P17174	413 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	AMPD1	P23109	780 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RPL34	P49207	117 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GTF2A2	P52657	109 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	BMPR2	Q13873	1038 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	C1QTNF12	Q5T7M4	302 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NCBP2-AS2	Q69YL0	99 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MPP5	Q8N3R9	675 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ENDOV	Q8N8Q3	282 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	APPL2	Q8NEU8	664 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GSDMB	Q8TAX9	411 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HSFY1	Q96LI6	401 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UGT1A7	Q9HAW7	530 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UGT1A10	Q9HAW8	530 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	UGT1A8	Q9HAW9	530 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NUMBL	Q9Y6R0	609 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RALGAPA2	Q2PPJ7	1873 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SMIM35	A0A1B0GVV1	85 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	KRT38	O76015	456 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TGDS	O95455	350 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CSH1	P0DML2	217 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CSH2	P0DML3	217 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SCNN1B	P51168	640 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ARFIP2	P53365	341 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MUM1	Q2TAK8	710 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TRMT10B	Q6PF06	316 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FAM131B	Q86XD5	332 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PYROXD2	Q8N2H3	581 aa		13.64	□□□□□ -0.23

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