RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 UBA3Q8TBC4 463 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 RNF139Q8WU17 664 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 CYB5D2Q8WUJ1 264 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 SNX19Q92543 992 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 UBXN6Q9BZV1 441 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 SCAND2PQ9GZW5 306 aaPredicted RBP15.83■□□□□ 0.12
SREBF1-222ENST00000583732 ITM2CQ9NQX7 267 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 HESX1Q9UBX0 185 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 PCDHB9Q9Y5E1 797 aa15.83■□□□□ 0.12
SREBF1-222ENST00000583732 WDFY3Q8IZQ1 3526 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 PCNX2A6NKB5 2137 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 A0A1B0GTW7 788 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 PIK3R2O00459 728 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 NPC1O15118 1278 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 MSI1O43347 362 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 LCP1P13796 627 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 HOXD9P28356 352 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 RDXP35241 583 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 PRCPP42785 496 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 BST2Q10589 180 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 ENPP2Q13822 863 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 EIF4HQ15056 248 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 TRIP4Q15650 581 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 FNDC3BQ53EP0 1204 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 METTL3Q86U44 580 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 SIX6OS1Q8N1H7 587 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 ERCC4Q92889 916 aaPredicted RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 IPO9Q96P70 1041 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 TSG101Q99816 390 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 OLA1Q9NTK5 396 aaKnown RBP15.82■□□□□ 0.12
SREBF1-222ENST00000583732 MSRB2Q9Y3D2 182 aa15.82■□□□□ 0.12
SREBF1-222ENST00000583732 TRIM49BA6NDI0 452 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 SRRM3A6NNA2 597 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-222ENST00000583732 YJEFN3A6XGL0 299 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 E7ENQ6 273 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 GJB3O75712 270 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 OXTRP30559 389 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 HARS2P49590 506 aaKnown RBP15.81■□□□□ 0.12
SREBF1-222ENST00000583732 RGS7P49802 495 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 SGSHP51688 502 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 TRIP6Q15654 476 aaKnown RBP15.81■□□□□ 0.12
SREBF1-222ENST00000583732 CACNA1EQ15878 2313 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 MPPE1Q53F39 396 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 PM20D1Q6GTS8 502 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 PNPLA1Q8N8W4 532 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 RBBP8NLQ8NC74 664 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-222ENST00000583732 TMEM131Q92545 1883 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 CCDC34Q96HJ3 373 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 FAXDC2Q96IV6 333 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 SLC2A11Q9BYW1 496 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 IL21RQ9HBE5 538 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 EIF2B4Q9UI10 523 aaKnown RBP15.81■□□□□ 0.12
SREBF1-222ENST00000583732 ATP6V1DQ9Y5K8 247 aa15.81■□□□□ 0.12
SREBF1-222ENST00000583732 H0Y626 953 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 SLC16A3O15427 465 aaKnown RBP15.8■□□□□ 0.12
SREBF1-222ENST00000583732 TRIM16O95361 564 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 FTH1P19P0C7X4 201 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 HLA-FP30511 346 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 ZNF132P52740 706 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 PMS1P54277 932 aaKnown RBP15.8■□□□□ 0.12
SREBF1-222ENST00000583732 YWHAEP62258 255 aaKnown RBP15.8■□□□□ 0.12
SREBF1-222ENST00000583732 ZNF423Q2M1K9 1284 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 BSPRYQ5W0U4 402 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 ANKRD40Q6AI12 368 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 CHST9Q7L1S5 443 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 OR2T3Q8NH03 318 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 SETD7Q8WTS6 366 aaKnown RBP15.8■□□□□ 0.12
SREBF1-222ENST00000583732 DNASE2BQ8WZ79 361 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 LHX5Q9H2C1 402 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 ABCB8Q9NUT2 735 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 RMND1Q9NWS8 449 aa15.8■□□□□ 0.12
SREBF1-222ENST00000583732 HBS1LQ9Y450 684 aaKnown RBP15.8■□□□□ 0.12
SREBF1-222ENST00000583732 TP53BP1Q12888 1972 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 METTL12A8MUP2 240 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 BCAT2O15382 392 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 CALCAP01258 141 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 VDRP11473 427 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 DAOAP59103 153 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 MCCD1P59942 119 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 SLC14A1Q13336 389 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 HNRNPDQ14103 355 aaKnown RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 E2F5Q15329 346 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 RAB44Q7Z6P3 723 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 CADM4Q8NFZ8 388 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 WFIKKN2Q8TEU8 576 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 NUP58Q9BVL2 599 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 ZDHHC5Q9C0B5 715 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 C6orf106Q9H6K1 298 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-222ENST00000583732 GAREM1Q9H706 876 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 GGA2Q9UJY4 613 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 COQ4Q9Y3A0 265 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 IGF2RP11717 2491 aa15.79■□□□□ 0.12
SREBF1-222ENST00000583732 GOLGA6L7A0A1B0GV03 622 aa15.78■□□□□ 0.12
SREBF1-222ENST00000583732 A0A1B0GVT2 93 aa15.78■□□□□ 0.12
SREBF1-222ENST00000583732 M0QYV0 167 aa15.78■□□□□ 0.12
SREBF1-222ENST00000583732 O00370 1275 aa15.78■□□□□ 0.12
SREBF1-222ENST00000583732 SETSIPP0DME0 302 aa15.78■□□□□ 0.12
SREBF1-222ENST00000583732 MATKP42679 507 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms