RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 GOLGA8IPA6NC78 632 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 GOLGA8JA6NMD2 632 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 K7ENP7 123 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 AP1G2O75843 785 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 MPOP05164 745 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 GP1BBP13224 206 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 TNNI1P19237 187 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 ATICP31939 592 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 RXRGP48443 463 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 CACNA2D1P54289 1103 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 ZNF445P59923 1031 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 ZNF776Q68DI1 518 aaPredicted RBP11.68□□□□□ -0.54
CASC3-208ENST00000583649 MCTP1Q6DN14 999 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
CASC3-208ENST00000583649 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 SFR1Q86XK3 245 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 WFIKKN2Q8TEU8 576 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 SYAP1Q96A49 352 aaPredicted RBP11.68□□□□□ -0.54
CASC3-208ENST00000583649 GRAMD1AQ96CP6 724 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 DACH1Q9UI36 760 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 LIMCH1Q9UPQ0 1083 aa11.68□□□□□ -0.54
CASC3-208ENST00000583649 TLR4O00206 839 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 GREM1O60565 184 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 USP12O75317 370 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 TBX18O95935 607 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 P4HA1P13674 534 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 RPS14P62263 151 aaKnown RBP11.67□□□□□ -0.54
CASC3-208ENST00000583649 ST3GAL1Q11201 340 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 ZNF211Q13398 564 aaPredicted RBP11.67□□□□□ -0.54
CASC3-208ENST00000583649 SERINC3Q13530 473 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 KCNT1Q5JUK3 1230 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 PRAMEF14Q5SWL7 426 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 Q6ZNB5 142 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 DYMQ7RTS9 669 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 TRAPPC11Q7Z392 1133 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 ZNF557Q8N988 423 aaPredicted RBP11.67□□□□□ -0.54
CASC3-208ENST00000583649 WBP2Q969T9 261 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 PIWIL1Q96J94 861 aaKnown RBP11.67□□□□□ -0.54
CASC3-208ENST00000583649 TRIM4Q9C037 500 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 DPEP3Q9H4B8 488 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 PCIF1Q9H4Z3 704 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 KRT82Q9NSB4 513 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 ANKMY1Q9P2S6 941 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 SCML2Q9UQR0 700 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 PCDHA5Q9Y5H7 936 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 SLCO1B1Q9Y6L6 691 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 CABIN1Q9Y6J0 2220 aa11.67□□□□□ -0.54
CASC3-208ENST00000583649 ENO4A6NNW6 628 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 PHACTR2O75167 634 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 PPP1R37O75864 691 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 BMP15O95972 392 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 AFPP02771 609 aaKnown RBP11.66□□□□□ -0.54
CASC3-208ENST00000583649 C7P10643 843 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 ALPPL2P10696 532 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 RARGP13631 454 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 NUDT1P36639 197 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 LONP1P36776 959 aaKnown RBP11.66□□□□□ -0.54
CASC3-208ENST00000583649 DUSP3P51452 185 aaPredicted RBP11.66□□□□□ -0.54
CASC3-208ENST00000583649 WNT7BP56706 349 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 ST8SIA6P61647 398 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 OVGP1Q12889 678 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 AHI1Q8N157 1196 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 OR5B17Q8NGF7 314 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 OR2T34Q8NGX1 318 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 VCPIP1Q96JH7 1222 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 SERAC1Q96JX3 654 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 OMDQ99983 421 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 CBWD1Q9BRT8 395 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 TMEM30AQ9NV96 361 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 FBXL12Q9NXK8 326 aa11.66□□□□□ -0.54
CASC3-208ENST00000583649 TERTO14746 1132 aaKnown RBP11.65□□□□□ -0.54
CASC3-208ENST00000583649 STC2O76061 302 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
CASC3-208ENST00000583649 IGHV4-34P06331 123 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 FAM200BP0CF97 657 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 DLATP10515 647 aaKnown RBP11.65□□□□□ -0.54
CASC3-208ENST00000583649 CORO1AP31146 461 aaKnown RBP11.65□□□□□ -0.54
CASC3-208ENST00000583649 CCR5P51681 352 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 MAP3K7CLP57077 242 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 NXPH1P58417 271 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 MPPE1Q53F39 396 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 KIAA1614Q5VZ46 1190 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 IGF2-ASQ6U949 168 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 IQCHQ86VS3 1027 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 ARL14Q8N4G2 192 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 ZNF276Q8N554 614 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 MFSD2AQ8NA29 543 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 SORCS1Q8WY21 1168 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 ZSCAN31Q96LW9 406 aaPredicted RBP11.65□□□□□ -0.54
CASC3-208ENST00000583649 TMEM245Q9H330 911 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 OLFML3Q9NRN5 406 aa11.65□□□□□ -0.54
CASC3-208ENST00000583649 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms