RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 CPXM2Q8N436 756 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 DUSP16Q9BY84 665 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 IMPG2Q9BZV3 1241 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 PCED1AQ9H1Q7 454 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 GOLPH3LQ9H4A5 285 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 APOBEC3GQ9HC16 384 aaKnown RBP14.22□□□□□ -0.13
SS18-222ENST00000582792 EXOC1Q9NV70 894 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
SS18-222ENST00000582792 EIF2B4Q9UI10 523 aaKnown RBP14.22□□□□□ -0.13
SS18-222ENST00000582792 ZNF202O95125 648 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 KIF20AO95235 890 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 EPHX1P07099 455 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 HMBSP08397 361 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 CD58P19256 250 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 VAMP7P51809 220 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 EFEMP1Q12805 493 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 PPP1R26Q5T8A7 1209 aaPredicted RBP14.21□□□□□ -0.13
SS18-222ENST00000582792 CEP135Q66GS9 1140 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 DENND1CQ8IV53 801 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 FMR1NBQ8N0W7 255 aaPredicted RBP14.21□□□□□ -0.13
SS18-222ENST00000582792 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 CDC6Q99741 560 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 SLC2A11Q9BYW1 496 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 CIPCQ9C0C6 399 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 DKK4Q9UBT3 224 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 CLEC4EQ9ULY5 219 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 FRMD4BQ9Y2L6 1034 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 RAXQ9Y2V3 346 aa14.21□□□□□ -0.13
SS18-222ENST00000582792 A0A1B0GVT2 93 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 MAPK13O15264 365 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 TIMM44O43615 452 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 ATXN1LP0C7T5 689 aaKnown RBP14.2□□□□□ -0.14
SS18-222ENST00000582792 AFF3P51826 1226 aaKnown RBP14.2□□□□□ -0.14
SS18-222ENST00000582792 KMT5BQ4FZB7 885 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 TMEM215Q68D42 235 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 SERPINA13PQ6UXR4 307 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 KRBA2Q6ZNG9 492 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 CACUL1Q86Y37 369 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 FAM217AQ8IXS0 508 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 ARHGAP18Q8N392 663 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 OR2T3Q8NH03 318 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 TAS1R2Q8TE23 839 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 RHBDD1Q8TEB9 315 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 SORCS1Q8WY21 1168 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 PAGE5Q96GU1 130 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 DNAI2Q9GZS0 605 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 NIF3L1Q9GZT8 377 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 SCUBE2Q9NQ36 999 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 MARCH2Q9P0N8 246 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 STRIP2Q9ULQ0 834 aa14.2□□□□□ -0.14
SS18-222ENST00000582792 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 KALRNO60229 2985 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 C7P10643 843 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 GCLMP48507 274 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 CSNK1EP49674 416 aaKnown RBP14.19□□□□□ -0.14
SS18-222ENST00000582792 ARID5AQ03989 594 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 CAMK2GQ13555 558 aaPredicted RBP14.19□□□□□ -0.14
SS18-222ENST00000582792 SUZ12Q15022 739 aaKnown RBP14.19□□□□□ -0.14
SS18-222ENST00000582792 FAM124AQ86V42 546 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 DDI1Q8WTU0 396 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 HNRNPLLQ8WVV9 542 aaKnown RBP14.19□□□□□ -0.14
SS18-222ENST00000582792 SNX19Q92543 992 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 UBXN6Q9BZV1 441 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 OSGEPQ9NPF4 335 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 TRAF3IP3Q9Y228 551 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 SLCO1B1Q9Y6L6 691 aa14.19□□□□□ -0.14
SS18-222ENST00000582792 KNL1Q8NG31 2342 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 SLC12A8A0AV02 714 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 CALUO43852 315 aaPredicted RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 GADD45BO75293 160 aaPredicted RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 HLA-EP13747 358 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 ACSL1P33121 698 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 YWHAGP61981 247 aaKnown RBP eCLIP14.18□□□□□ -0.14
SS18-222ENST00000582792 PPP3CAQ08209 521 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 KIF19Q2TAC6 998 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 MPPE1Q53F39 396 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 ZNF394Q53GI3 561 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 RAB41Q5JT25 222 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 RSRC2Q7L4I2 434 aaKnown RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 GALNT15Q8N3T1 639 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 PLD4Q96BZ4 506 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 LHX5Q9H2C1 402 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 TMEM245Q9H330 911 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 C6orf106Q9H6K1 298 aaPredicted RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 TM9SF3Q9HD45 589 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 BTBD3Q9Y2F9 522 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 SNX11Q9Y5W9 270 aa14.18□□□□□ -0.14
SS18-222ENST00000582792 MUC22E2RYF6 1773 aaPredicted RBP14.18□□□□□ -0.14
SS18-222ENST00000582792 NUMA1Q14980 2115 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 TMEM131Q92545 1883 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 CABIN1Q9Y6J0 2220 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 SETXQ7Z333 2677 aaKnown RBP14.17□□□□□ -0.14
SS18-222ENST00000582792 GOLGA8CPA6NN73 597 aa14.17□□□□□ -0.14
SS18-222ENST00000582792 HOXD9P28356 352 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms