RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ASIC1P78348 528 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PDE4CQ08493 712 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GEN1Q17RS7 908 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 HS1BP3Q53T59 392 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 ATG14Q6ZNE5 492 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SYCP3Q8IZU3 236 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 RASSF8Q8NHQ8 419 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SCAMP5Q8TAC9 235 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 BHMTQ93088 406 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SAAL1Q96ER3 474 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SLC2A11Q9BYW1 496 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CIPCQ9C0C6 399 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MRPL44Q9H9J2 332 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 ERVMER34-1Q9H9K5 563 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PDE11AQ9HCR9 933 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SEPT3Q9UH03 358 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SCML1Q9UN30 329 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SLCO1B1Q9Y6L6 691 aa9.21□□□□□ -0.94
CDK5RAP3-224ENST00000582275 USP9XQ93008 2570 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 A8MXQ7 604 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 K7ENP7 123 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CBX4O00257 560 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MT-CO3P00414 261 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SFTPCP11686 197 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GAP43P17677 238 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PRKCHP24723 683 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 EPHA8P29322 1005 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 RXRGP48443 463 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 LSSP48449 732 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CACNA2D1P54289 1103 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 WNT7BP56706 349 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 INSM1Q01101 510 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MCM6Q14566 821 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 KCNT1Q5JUK3 1230 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 L1TD1Q5T7N2 865 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 INO80CQ6PI98 192 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 LAYNQ6UX15 382 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 KDM7AQ6ZMT4 941 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 Q6ZNB5 142 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 USP30Q70CQ3 517 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 FAM35AQ86V20 835 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CACUL1Q86Y37 369 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 WDR49Q8IV35 697 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GPD1LQ8N335 351 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 RAD54LQ92698 747 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 WBP2Q969T9 261 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 TNIP3Q96KP6 325 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 DEPDC7Q96QD5 511 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CDK5RAP1Q96SZ6 601 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 KCNK16Q96T55 309 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MRPL45Q9BRJ2 306 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MED10Q9BTT4 135 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 B3GNT5Q9BYG0 378 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 DCLK3Q9C098 648 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 TMEM30AQ9NV96 361 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PLK2Q9NYY3 685 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PLA2G4CQ9UP65 541 aa9.2□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PIEZO2Q9H5I5 2752 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 ARID1BQ8NFD5 2236 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 LRRC72A6NJI9 287 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 ZNF233A6NK53 670 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CLDN5O00501 218 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 MAGEC1O60732 1142 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 TRIM21P19474 475 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 CD38P28907 300 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 INHBCP55103 352 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GABREP78334 506 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 NFATC3Q12968 1075 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 FNDC3BQ53EP0 1204 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 ZNF776Q68DI1 518 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 IGF2-ASQ6U949 168 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 DYMQ7RTS9 669 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 SFR1Q86XK3 245 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 WFIKKN2Q8TEU8 576 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 NOC3LQ8WTT2 800 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 LARP4BQ92615 738 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GRAMD1AQ96CP6 724 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 PIWIL1Q96J94 861 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 STRA6Q9BX79 667 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 POLR1BQ9H9Y6 1135 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 KIAA1586Q9HCI6 787 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 AASDHPPTQ9NRN7 309 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 BLOC1S4Q9NUP1 217 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 ANKMY1Q9P2S6 941 aa9.19□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GOLGA8IPA6NC78 632 aa9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GOLGA8JA6NMD2 632 aa9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 AP1G2O75843 785 aa9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 STC2O76061 302 aa9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 GCNT3O95395 438 aa9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 STAU1O95793 577 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 IGHV4-34P06331 123 aa9.18□□□□□ -0.94
CDK5RAP3-224ENST00000582275 RALAP11233 206 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms