RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 CENPCQ03188 943 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 CSTF1Q05048 431 aaKnown RBP21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 RING1Q06587 406 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 FAM133BQ5BKY9 247 aaKnown RBP21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 NUGGCQ68CJ6 796 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 GRAMD4Q6IC98 578 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 FAM217AQ8IXS0 508 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 CPXM2Q8N436 756 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 JOSD2Q8TAC2 188 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 DDI1Q8WTU0 396 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 RNF34Q969K3 372 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 XPO6Q96QU8 1125 aaKnown RBP21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 TBCBQ99426 244 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 TMEM59LQ9UK28 342 aa21.5■■□□□ 1.03
PPP4R1-221ENST00000582240 A0A1W2PQJ5 194 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 DDX3XO00571 662 aaKnown RBP eCLIP21.49■■□□□ 1.035e-13■■■■■ 40.6
PPP4R1-221ENST00000582240 CISD3P0C7P0 127 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 SLC11A2P49281 568 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 NUBP1P53384 320 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 EIF4EBP2Q13542 120 aaPredicted RBP21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 RAB6CQ53S08 254 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 C2orf27AQ580R0 203 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 ADGRF1Q5T601 910 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 ACAD10Q6JQN1 1059 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 PHF13Q86YI8 300 aaPredicted RBP21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 RPLP0P6Q8NHW5 317 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 EXOC4Q96A65 974 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 TMA16Q96EY4 203 aaKnown RBP21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 NPY6RQ99463 290 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 RAB6CQ9H0N0 254 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 NUCKS1Q9H1E3 243 aaKnown RBP21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 STIM2Q9P246 746 aa21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 LUC7L2Q9Y383 392 aaKnown RBP21.49■■□□□ 1.03
PPP4R1-221ENST00000582240 TBC1D3BA6NDS4 549 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 GFRA2O00451 464 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 CACNG3O60359 315 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 PENKP01210 267 aaPredicted RBP21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 CYBBP04839 570 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 TPM3P06753 285 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 PLEKP08567 350 aaPredicted RBP21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 GBP1P32455 592 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 EIF2DP41214 584 aaKnown RBP21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 PRKCIP41743 596 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 GRIA2P42262 883 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 PTPN5P54829 565 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 ZBED6P86452 979 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 NNTQ13423 1086 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 RAP1GAP2Q684P5 730 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 HGSNATQ68CP4 663 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 MON1BQ7L1V2 547 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 SPEM1Q8N4L4 309 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 CCDC33Q8N5R6 958 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 ATOH1Q92858 354 aaPredicted RBP21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 CFAP57Q96MR6 1250 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 PRRX2Q99811 253 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 STOML2Q9UJZ1 356 aa21.48■■□□□ 1.03
PPP4R1-221ENST00000582240 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 TBL1XO60907 577 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 APOEP02649 317 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 SP9P0CG40 484 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 TIE1P35590 1138 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 SCNN1AP37088 669 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 DGKGP49619 791 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 MPPE1Q53F39 396 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 TDRD12Q587J7 1177 aaKnown RBP21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 C10orf76Q5T2E6 689 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 VSTM4Q8IW00 320 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 MCOLN2Q8IZK6 566 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 CFAP52Q8N1V2 620 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 SYNPOQ8N3V7 929 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 RXFP2Q8WXD0 754 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 PHOX2BQ99453 314 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 KCNH6Q9H252 994 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 ANLNQ9NQW6 1124 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 TMPRSS4Q9NRS4 437 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 PIGVQ9NUD9 493 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 HCN2Q9UL51 889 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.47■■□□□ 1.032e-6■□□□□ 8.7
PPP4R1-221ENST00000582240 SNX10Q9Y5X0 201 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 ITIH6Q6UXX5 1313 aa21.47■■□□□ 1.03
PPP4R1-221ENST00000582240 KCNU1A8MYU2 1149 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 PRRT4C9JH25 899 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 ADCY5O95622 1261 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 LATS1O95835 1130 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 CALB1P05937 261 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 HOXD9P28356 352 aaPredicted RBP21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 GGCXP38435 758 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 CXCL12P48061 93 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 RPS24P62847 133 aaKnown RBP21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 ATP11AP98196 1134 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 DEUP1Q05D60 604 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 DMWDQ09019 674 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 C15orf59Q2T9L4 293 aaPredicted RBP21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 SH3PXD2AQ5TCZ1 1133 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 PIK3R6Q5UE93 754 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 CHSY1Q86X52 802 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 LGI2Q8N0V4 545 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 ATP6V0D2Q8N8Y2 350 aa21.46■■□□□ 1.03
PPP4R1-221ENST00000582240 TERB1Q8NA31 727 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms