RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 CD59P13987 128 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 HOXD9P28356 352 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 HARS2P49590 506 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 TPMTP51580 245 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SGSHP51688 502 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 FKBP3Q00688 224 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 TRIP4Q15650 581 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 DCAF12L1Q5VU92 463 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PM20D1Q6GTS8 502 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SERPINA13PQ6UXR4 307 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 SIX6OS1Q8N1H7 587 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 PRCCQ92733 491 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 FOXJ1Q92949 421 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 FAXDC2Q96IV6 333 aa12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 TMEM121BQ9BXQ6 578 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 WSB2Q9NYS7 404 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 USP36Q9P275 1121 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-223ENST00000582114 O00370 1275 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SH3BP5O60239 455 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ACADMP11310 421 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 VDRP11473 427 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GNSP15586 552 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 HLA-FP30511 346 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 COPAP53621 1224 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 YWHAEP62258 255 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GRIK2Q13002 908 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 FNDC3BQ53EP0 1204 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 WDR45BQ5MNZ6 344 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 RFWD3Q6PCD5 774 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 TMEM270Q6UE05 265 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 FAM217AQ8IXS0 508 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ZC3H3Q8IXZ2 948 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 CHCHD4Q8N4Q1 142 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 RBBP8NLQ8NC74 664 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 CLEC4CQ8WTT0 213 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 TFAP2BQ92481 460 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SNX19Q92543 992 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GATA6Q92908 595 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 KAT5Q92993 513 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SLC35C1Q96A29 364 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ITM2CQ9NQX7 267 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ABCB8Q9NUT2 735 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 DNAAF2Q9NVR5 837 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SUSD2Q9UGT4 822 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ARMCX3Q9UH62 379 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 COQ4Q9Y3A0 265 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 PCDHB4Q9Y5E5 795 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 PCNX2A6NKB5 2137 aa12.14□□□□□ -0.47
CDK5RAP3-223ENST00000582114 AKAP13Q12802 2813 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GOLGA6L7A0A1B0GV03 622 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 M0QYV0 167 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 NPC1O15118 1278 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GABBR2O75899 941 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SMC2O95347 1197 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 FMO5P49326 533 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 DAOAP59103 153 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ENPP2Q13822 863 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 EIF4HQ15056 248 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 MPPE1Q53F39 396 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 KLHL10Q6JEL2 608 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 PMF1Q6P1K2 205 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 CHST9Q7L1S5 443 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 UBR7Q8N806 425 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 WFDC5Q8TCV5 224 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 TMA16Q96EY4 203 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GSDMAQ96QA5 445 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SLC2A11Q9BYW1 496 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 IL21RQ9HBE5 538 aa12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 EIF2B4Q9UI10 523 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 HBS1LQ9Y450 684 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-223ENST00000582114 CKAP5Q14008 2032 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 A0A1B0GTW7 788 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 RNF225M0QZC1 329 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 TBL1XO60907 577 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 GJB3O75712 270 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 TBXAS1P24557 533 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 LRRC63Q05C16 580 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 PKDCCQ504Y2 493 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 ADGRF1Q5T601 910 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 RRAGAQ7L523 313 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 METTL3Q86U44 580 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 PPM1KQ8N3J5 372 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 PNPLA1Q8N8W4 532 aa12.12□□□□□ -0.47
CDK5RAP3-223ENST00000582114 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms