RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 LMAN2Q12907 356 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 DAB2IPQ5VWQ8 1189 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 SLC23A3Q6PIS1 610 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 ARHGEF19Q8IW93 802 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 DDI1Q8WTU0 396 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 EDEM1Q92611 657 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 SRRTQ9BXP5 876 aaKnown RBP21.83■■□□□ 1.09
CCDC42-203ENST00000581598 SFMBT1Q9UHJ3 866 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.83■■□□□ 1.09
CCDC42-203ENST00000581598 RAD54BQ9Y620 910 aa21.83■■□□□ 1.09
CCDC42-203ENST00000581598 CACNA1BQ00975 2339 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 M0QYV0 167 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 CDX4O14627 284 aaPredicted RBP21.82■■□□□ 1.08
CCDC42-203ENST00000581598 TIMM44O43615 452 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 FBXO21O94952 628 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 LCP1P13796 627 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 BRD2P25440 801 aaKnown RBP21.82■■□□□ 1.08
CCDC42-203ENST00000581598 RPL34P49207 117 aaKnown RBP21.82■■□□□ 1.08
CCDC42-203ENST00000581598 STX17P56962 302 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 STARD3Q14849 445 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 STX1AQ16623 288 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 MEA1Q16626 185 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 TRIM61Q5EBN2 209 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 ADGRF1Q5T601 910 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 LRSAM1Q6UWE0 723 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 RRAGAQ7L523 313 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 MRGPRX1Q96LB2 322 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 KREMEN1Q96MU8 473 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 NUSAP1Q9BXS6 441 aaKnown RBP21.82■■□□□ 1.08
CCDC42-203ENST00000581598 TMEM74BQ9NUR3 256 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 ANO10Q9NW15 660 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 ELOVL2Q9NXB9 296 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 CLEC4EQ9ULY5 219 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 ACACBO00763 2458 aa21.82■■□□□ 1.08
CCDC42-203ENST00000581598 WASH3PC4AMC7 463 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 KRT37O76014 449 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 KCNK5O95279 499 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 IGLV3-27P01718 113 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 HOXD9P28356 352 aaPredicted RBP21.81■■□□□ 1.08
CCDC42-203ENST00000581598 IL12RB1P42701 662 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 RGS7P49802 495 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 RING1Q06587 406 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 DPCR1Q3MIW9 517 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 ARMCX6Q7L4S7 300 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 RABEPKQ7Z6M1 372 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 CEP76Q8TAP6 659 aa21.81■■□□□ 1.08
CCDC42-203ENST00000581598 INTS2Q9H0H0 1204 aaKnown RBP21.81■■□□□ 1.08
CCDC42-203ENST00000581598 LTFP02788 710 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 ITPKAP23677 461 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 PMLP29590 882 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 ZNF33AQ06730 810 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 FUT11Q495W5 492 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 N4BP2L1Q5TBK1 243 aaPredicted RBP21.8■■□□□ 1.08
CCDC42-203ENST00000581598 NUGGCQ68CJ6 796 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 SMYD5Q6GMV2 418 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 MLKLQ8NB16 471 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 AZIN2Q96A70 460 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 RWDD2AQ9UIY3 292 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 CYP8B1Q9UNU6 501 aa21.8■■□□□ 1.08
CCDC42-203ENST00000581598 ASCC3Q8N3C0 2202 aaKnown RBP21.8■■□□□ 1.08
CCDC42-203ENST00000581598 ZFHX4Q86UP3 3567 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 MSI1O43347 362 aaKnown RBP21.79■■□□□ 1.08
CCDC42-203ENST00000581598 GPD2P43304 727 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 ZNF234Q14588 700 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 DUOXA1Q1HG43 343 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 MPP7Q5T2T1 576 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 ENOSF1Q7L5Y1 443 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 KIAA0907Q7Z7F0 614 aaPredicted RBP21.79■■□□□ 1.08
CCDC42-203ENST00000581598 UNC45BQ8IWX7 931 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.79■■□□□ 1.08
CCDC42-203ENST00000581598 WFIKKN2Q8TEU8 576 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 GOLGA1Q92805 767 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 TMA16Q96EY4 203 aaKnown RBP21.79■■□□□ 1.08
CCDC42-203ENST00000581598 ZNF419Q96HQ0 510 aaPredicted RBP21.79■■□□□ 1.08
CCDC42-203ENST00000581598 FAM81BQ96LP2 452 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 USP36Q9P275 1121 aaKnown RBP21.79■■□□□ 1.08
CCDC42-203ENST00000581598 SLC6A14Q9UN76 642 aa21.79■■□□□ 1.08
CCDC42-203ENST00000581598 PCDH15Q96QU1 1955 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 SART1O43290 800 aaKnown RBP21.78■■□□□ 1.08
CCDC42-203ENST00000581598 C7P10643 843 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 NCAM1P13591 858 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 CSRP1P21291 193 aaKnown RBP21.78■■□□□ 1.08
CCDC42-203ENST00000581598 ACADSBP45954 432 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 SHC2P98077 582 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 CT47A1Q5JQC4 288 aaPredicted RBP21.78■■□□□ 1.08
CCDC42-203ENST00000581598 TMEM215Q68D42 235 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 BEND5Q7L4P6 421 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 SLC41A1Q8IVJ1 513 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 STK32AQ8WU08 396 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 PRDM16Q9HAZ2 1276 aa21.78■■□□□ 1.08
CCDC42-203ENST00000581598 MUC22E2RYF6 1773 aaPredicted RBP21.77■■□□□ 1.08
CCDC42-203ENST00000581598 IRAK2O43187 625 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 CALCAP01258 141 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 SERPINF2P08697 491 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 ENGP17813 658 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 KCNA4P22459 653 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 HLA-FP30511 346 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 NNTQ13423 1086 aa21.77■■□□□ 1.08
CCDC42-203ENST00000581598 KIAA1324Q6UXG2 1013 aaKnown RBP21.77■■□□□ 1.08
CCDC42-203ENST00000581598 ZNF557Q8N988 423 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms