RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PIK3R6Q5UE93 754 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 TAF3Q5VWG9 929 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 TPGS1Q6ZTW0 290 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 CACNA2D4Q7Z3S7 1137 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 PHF13Q86YI8 300 aaPredicted RBP13.14□□□□□ -0.31
SNORD55-201ENST00000581525 CAMKK1Q8N5S9 505 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 TERB1Q8NA31 727 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 CPA5Q8WXQ8 436 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
SNORD55-201ENST00000581525 ATOH1Q92858 354 aaPredicted RBP13.14□□□□□ -0.31
SNORD55-201ENST00000581525 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
SNORD55-201ENST00000581525 AGPAT1Q99943 283 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 C2orf42Q9NWW7 574 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 ZSCAN32Q9NX65 697 aa13.14□□□□□ -0.31
SNORD55-201ENST00000581525 MYOFQ9NZM1 2061 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 TCRBV5S1A1TA0A578 114 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 SLC2A3P11169 496 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 HNRNPLP14866 589 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNORD55-201ENST00000581525 SLC11A2P49281 568 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 CSTF1Q05048 431 aaKnown RBP13.13□□□□□ -0.31
SNORD55-201ENST00000581525 ANO4Q32M45 955 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 OTUD1Q5VV17 481 aaPredicted RBP13.13□□□□□ -0.31
SNORD55-201ENST00000581525 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 SFTPA1Q8IWL2 248 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNORD55-201ENST00000581525 NAT16Q8N8M0 369 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 IL17RCQ8NAC3 791 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 TMA16Q96EY4 203 aaKnown RBP13.13□□□□□ -0.31
SNORD55-201ENST00000581525 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 BTN2A3PQ96KV6 586 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 PRMT1Q99873 361 aaKnown RBP13.13□□□□□ -0.31
SNORD55-201ENST00000581525 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 EBF1Q9UH73 591 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 ITIH6Q6UXX5 1313 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 FRYLO94915 3013 aa13.13□□□□□ -0.31
SNORD55-201ENST00000581525 ANTXRLA6NF34 631 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 PRRT4C9JH25 899 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 NEDD8-MDP1E9PL57 170 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 TRIM24O15164 1050 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 CYBBP04839 570 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 C7P10643 843 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 GZMAP12544 262 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
SNORD55-201ENST00000581525 SLC6A4P31645 630 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 GBP1P32455 592 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 DGKGP49619 791 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 CXCR3P49682 368 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 ENPP2Q13822 863 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 SLC25A52Q3SY17 297 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 C5orf22Q49AR2 442 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 ZC3H12AQ5D1E8 599 aaKnown RBP13.12□□□□□ -0.31
SNORD55-201ENST00000581525 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 PPP1R2P3Q6NXS1 205 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 MON1BQ7L1V2 547 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 RPLP0P6Q8NHW5 317 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 ACDQ96AP0 544 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 FAM122AQ96E09 287 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 DDX50Q9BQ39 737 aaKnown RBP13.12□□□□□ -0.31
SNORD55-201ENST00000581525 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
SNORD55-201ENST00000581525 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
SNORD55-201ENST00000581525 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNORD55-201ENST00000581525 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 MMP17Q9ULZ9 603 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 CAPN11Q9UMQ6 739 aa13.12□□□□□ -0.31
SNORD55-201ENST00000581525 WDR87Q6ZQQ6 2873 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 TBC1D3BA6NDS4 549 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 NPC1O15118 1278 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 TIMM44O43615 452 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 F9P00740 461 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
SNORD55-201ENST00000581525 CCR1P32246 355 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 CNR2P34972 360 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
SNORD55-201ENST00000581525 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 MS4A13Q5J8X5 152 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
SNORD55-201ENST00000581525 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
SNORD55-201ENST00000581525 HGSNATQ68CP4 663 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 ACAD10Q6JQN1 1059 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 TRNP1Q6NT89 227 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 WDR5BQ86VZ2 330 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 ZNF557Q8N988 423 aaPredicted RBP13.11□□□□□ -0.31
SNORD55-201ENST00000581525 SLC30A5Q8TAD4 765 aa13.11□□□□□ -0.31
SNORD55-201ENST00000581525 ADAM32Q8TC27 787 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms