RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP85-217ENST00000581335 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
NUP85-217ENST00000581335 NUDT5Q9UKK9 219 aa9.22□□□□□ -0.93
NUP85-217ENST00000581335 SPTBN2O15020 2390 aa9.21□□□□□ -0.93
NUP85-217ENST00000581335 A6NJY4 79 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 PRRT4C9JH25 899 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 MDM4O15151 490 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CILPO75339 1184 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 ZNF217O75362 1048 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 STC2O76061 302 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 PROS1P07225 676 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 RALAP11233 206 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CD58P19256 250 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 ITPKAP23677 461 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 RPL13P26373 211 aaKnown RBP9.21□□□□□ -0.94
NUP85-217ENST00000581335 HOXD12P35452 270 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 PSMC2P35998 433 aaKnown RBP9.21□□□□□ -0.94
NUP85-217ENST00000581335 GGCXP38435 758 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 DGKGP49619 791 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 NDUFA8P51970 172 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 KRT85P78386 507 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 FOXC1Q12948 553 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 ADAM9Q13443 819 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 DUOXA1Q1HG43 343 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 COX20Q5RI15 118 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 C10orf120Q5SQS8 335 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 C16orf46Q6P387 395 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 Q6ZNB5 142 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 TOGARAM2Q6ZUX3 1019 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CCDC186Q7Z3E2 898 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 SCD5Q86SK9 330 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 FAM186BQ8IYM0 893 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CHPFQ8IZ52 775 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 GUF1Q8N442 669 aaKnown RBP9.21□□□□□ -0.94
NUP85-217ENST00000581335 DEFB119Q8N690 84 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
NUP85-217ENST00000581335 CCDC150Q8NCX0 1101 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 DEFB124Q8NES8 71 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CEP76Q8TAP6 659 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 FAXDC2Q96IV6 333 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CDK5RAP1Q96SZ6 601 aaKnown RBP9.21□□□□□ -0.94
NUP85-217ENST00000581335 GABRG3Q99928 467 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 NIF3L1Q9GZT8 377 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 MMRN2Q9H8L6 949 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 TMEM8AQ9HCN3 771 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CD248Q9HCU0 757 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CLIC5Q9NZA1 410 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 CALCOCO1Q9P1Z2 691 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 NAGPAQ9UK23 515 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 SLC6A14Q9UN76 642 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 WASF3Q9UPY6 502 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 ZNF510Q9Y2H8 683 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 USP3Q9Y6I4 520 aa9.21□□□□□ -0.94
NUP85-217ENST00000581335 ATXN2Q99700 1313 aaKnown RBP9.21□□□□□ -0.94
NUP85-217ENST00000581335 IGHV1OR15-9A0A0B4J2B8 117 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 GFRA2O00451 464 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 IL2RAP01589 272 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 SERPINF2P08697 491 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 GTF2H1P32780 548 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 CHKAP35790 457 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 MAPK8P45983 427 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 COG7P83436 770 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 ZNF33AQ06730 810 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 ZNF394Q53GI3 561 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 KRT39Q6A163 491 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 KIAA1211LQ6NV74 962 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 KRBA2Q6ZNG9 492 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 RABEPKQ7Z6M1 372 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 HEXIM2Q96MH2 286 aaKnown RBP9.2□□□□□ -0.94
NUP85-217ENST00000581335 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 SLC32A1Q9H598 525 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 PLK2Q9NYY3 685 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 ZDHHC9Q9Y397 364 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 RAD54BQ9Y620 910 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 PI4KAP42356 2102 aa9.2□□□□□ -0.94
NUP85-217ENST00000581335 PCDH15Q96QU1 1955 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 A0A1W2PQ27 194 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 A0A1W2PQ64 194 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 A0A1W2PQD8 194 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 UPK3BL1B0FP48 263 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 C1QTNF9BB2RNN3 333 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 WASH3PC4AMC7 463 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 UPK3BL2E5RIL1 263 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 FZD6O60353 706 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 RECKO95980 971 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 TOP3BO95985 862 aaKnown RBP9.19□□□□□ -0.94
NUP85-217ENST00000581335 KLKB1P03952 638 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 CFIP05156 583 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 HMBSP08397 361 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 C1QTNF9P0C862 333 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 SPINK2P20155 84 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 ZNF132P52740 706 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 ATXN3P54252 364 aaPredicted RBP9.19□□□□□ -0.94
NUP85-217ENST00000581335 GFPT1Q06210 699 aaPredicted RBP9.19□□□□□ -0.94
NUP85-217ENST00000581335 SEMA3BQ13214 749 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 EDRF1Q3B7T1 1238 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
NUP85-217ENST00000581335 RAB41Q5JT25 222 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms