RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 EEF2KMTQ96G04 330 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
RFFL-209ENST00000581265 ARID3AQ99856 593 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 ZDHHC5Q9C0B5 715 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
RFFL-209ENST00000581265 CLEC4EQ9ULY5 219 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 COQ4Q9Y3A0 265 aa11.1□□□□□ -0.63
RFFL-209ENST00000581265 ADAMTS9Q9P2N4 1935 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 AKAP13Q12802 2813 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 A0A1B0GTW7 788 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 METTL12A8MUP2 240 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 CETN3O15182 167 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 SH3BP5O60239 455 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 SYNCRIPO60506 623 aaKnown RBP11.09□□□□□ -0.63
RFFL-209ENST00000581265 HMBSP08397 361 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 TPMTP51580 245 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 TKTL1P51854 596 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 ZNF234Q14588 700 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 TRIP6Q15654 476 aaKnown RBP11.09□□□□□ -0.63
RFFL-209ENST00000581265 TMEM215Q68D42 235 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 ANKS1BQ7Z6G8 1248 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 DDI1Q8WTU0 396 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 PRCCQ92733 491 aaPredicted RBP11.09□□□□□ -0.63
RFFL-209ENST00000581265 SIPA1Q96FS4 1042 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 NUP58Q9BVL2 599 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 GPR174Q9BXC1 333 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 OLA1Q9NTK5 396 aaKnown RBP11.09□□□□□ -0.63
RFFL-209ENST00000581265 STOML2Q9UJZ1 356 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
RFFL-209ENST00000581265 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
RFFL-209ENST00000581265 FLNBO75369 2602 aaKnown RBP11.08□□□□□ -0.64
RFFL-209ENST00000581265 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 XPO1O14980 1071 aaKnown RBP11.08□□□□□ -0.64
RFFL-209ENST00000581265 CAPNS1P04632 268 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 EPB41P11171 864 aaKnown RBP11.08□□□□□ -0.64
RFFL-209ENST00000581265 NCAM1P13591 858 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 HARS2P49590 506 aaKnown RBP11.08□□□□□ -0.64
RFFL-209ENST00000581265 COPAP53621 1224 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 ZNF445P59923 1031 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 PDE4CQ08493 712 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 GRIK2Q13002 908 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 MPPE1Q53F39 396 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 BSPRYQ5W0U4 402 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 BHLHA9Q7RTU4 235 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 RAB44Q7Z6P3 723 aaPredicted RBP11.08□□□□□ -0.64
RFFL-209ENST00000581265 C1orf216Q8TAB5 229 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 NDRG1Q92597 394 aaKnown RBP11.08□□□□□ -0.64
RFFL-209ENST00000581265 CCDC34Q96HJ3 373 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 ULBP1Q9BZM6 244 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 PCED1AQ9H1Q7 454 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 GOLPH3LQ9H4A5 285 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 LRRC4Q9HBW1 653 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 TSPAN16Q9UKR8 245 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 RAXQ9Y2V3 346 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 ATP6V1DQ9Y5K8 247 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 ASPMQ8IZT6 3477 aa11.08□□□□□ -0.64
RFFL-209ENST00000581265 MEI4A8MW99 385 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 TULP2O00295 520 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 BCAT2O15382 392 aaPredicted RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 CBFA2T3O75081 653 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 LATS1O95835 1130 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 EPHX1P07099 455 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 ZNF883P0CG24 379 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 PRKCHP24723 683 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 HOXD9P28356 352 aaPredicted RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 HLA-FP30511 346 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 PRCPP42785 496 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 BCAT1P54687 386 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 FKBP3Q00688 224 aaKnown RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 BST2Q10589 180 aaKnown RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 CAMK2GQ13555 558 aaPredicted RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 CUL2Q13617 745 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 GOLGA7BQ2TAP0 167 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 COBLL1Q53SF7 1204 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 SGO2Q562F6 1265 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 ADGRF1Q5T601 910 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 SERPINA13PQ6UXR4 307 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 DBX2Q6ZNG2 339 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 KIAA0907Q7Z7F0 614 aaPredicted RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 ZNF605Q86T29 641 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 FMNL3Q8IVF7 1028 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 SMYD4Q8IYR2 804 aaPredicted RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 SCML4Q8N228 414 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 MDM1Q8TC05 714 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 RNF139Q8WU17 664 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 ADAMTS14Q8WXS8 1223 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 SORCS1Q8WY21 1168 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 KCTD13Q8WZ19 329 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 TMA16Q96EY4 203 aaKnown RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 CAMK1GQ96NX5 476 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 IPO9Q96P70 1041 aaKnown RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 UBL7Q96S82 380 aaPredicted RBP11.07□□□□□ -0.64
RFFL-209ENST00000581265 CIPCQ9C0C6 399 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms