RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 NSFP46459 744 aaKnown RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 RPL34P49207 117 aaKnown RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CDR2Q01850 454 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 DMWDQ09019 674 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 STARD3Q14849 445 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 NCAPHQ15003 741 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CRY1Q16526 586 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 GAB4Q2WGN9 574 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ZSCAN23Q3MJ62 389 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 HSF5Q4G112 596 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 FAM102AQ5T9C2 384 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 MSANTD2Q6P1R3 559 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 FAM183BPQ6ZVS7 135 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 BEND5Q7L4P6 421 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ASCL5Q7RTU5 278 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 PHLDB2Q86SQ0 1253 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 LUZP1Q86V48 1076 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 SFTPA1Q8IWL2 248 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 DHX40Q8IX18 779 aaKnown RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ETFBKMTQ8IXQ9 262 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CPXM2Q8N436 756 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CARNMT1Q8N4J0 409 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ATP6V0D2Q8N8Y2 350 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF557Q8N988 423 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 TERB1Q8NA31 727 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 IL17RCQ8NAC3 791 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ZBTB44Q8NCP5 570 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF397Q8NF99 534 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 SLC20A1Q8WUM9 679 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 HMGB4Q8WW32 186 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 RUBCNQ92622 972 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 EZH1Q92800 747 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ERLEC1Q96DZ1 483 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 BTN2A3PQ96KV6 586 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ERGIC2Q96RQ1 377 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 SLC2A11Q9BYW1 496 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 SIK2Q9H0K1 926 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ZDHHC4Q9NPG8 344 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 RTN4Q9NQC3 1192 aaKnown RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 C2orf42Q9NWW7 574 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 GMEB2Q9UKD1 530 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 STAP1Q9ULZ2 295 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 MMP17Q9ULZ9 603 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 INVSQ9Y283 1065 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 GVINP1Q7Z2Y8 2422 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CACNA1IQ9P0X4 2223 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 TCRBV21S2A2A0A5A6 115 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 KCNU1A8MYU2 1149 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 PRRT4C9JH25 899 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 F5H5T6 163 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 H0Y626 953 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 K7ESF4 209 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 SGK1O00141 431 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 EPHB6O15197 1021 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 TEX33O43247 280 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 PAPSS2O95340 614 aaPredicted RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 MOCS3O95396 460 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 PENKP01210 267 aaPredicted RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ATP5BP06576 529 aaKnown RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CISD3P0C7P0 127 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 HOXB2P14652 356 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 FERP16591 822 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 DESP17661 470 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 POLR2EP19388 210 aaKnown RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 TNFAIP3P21580 790 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 NOS2P35228 1153 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 MATKP42679 507 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 KIR2DL1P43626 348 aaPredicted RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 SULT1E1P49888 294 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 UBASH3AP57075 661 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 FANCCQ00597 558 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 DEUP1Q05D60 604 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 SRSF5Q13243 272 aaKnown RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 MTA1Q13330 715 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CDH18Q13634 790 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 BYSLQ13895 437 aaKnown RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ELF2Q15723 593 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 PTPN20Q4JDL3 420 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 C2CD6Q53TS8 623 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 RABGAP1LQ5R372 815 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 RAP1GAP2Q684P5 730 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 DPY19L2P1Q6NXN4 242 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 LRSAM1Q6UWE0 723 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 LRRC31Q6UY01 552 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 MMS22LQ6ZRQ5 1243 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 SLC26A9Q7LBE3 791 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ANKS1BQ7Z6G8 1248 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 TAC4Q86UU9 113 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 WDR5BQ86VZ2 330 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CHSY1Q86X52 802 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 KIAA2013Q8IYS2 634 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 LGI2Q8N0V4 545 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CFAP52Q8N1V2 620 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms