RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 PPP3CCP48454 512 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 MYL6P60660 151 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 NOP14P78316 857 aaKnown RBP9.33□□□□□ -0.92
SNX11-205ENST00000578861 GAD2Q05329 585 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 CYP24A1Q07973 514 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 ILKQ13418 452 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 TRPC3Q13507 836 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 STARD3Q14849 445 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 FOXR1Q6PIV2 292 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 PHTF2Q8N3S3 785 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 SCFD1Q8WVM8 642 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 ELMO3Q96BJ8 720 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 DHX58Q96C10 678 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 CCDC97Q96F63 343 aaPredicted RBP9.33□□□□□ -0.92
SNX11-205ENST00000578861 C8orf48Q96LL4 319 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 CEP295NLQ96MC4 621 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 SLITRK1Q96PX8 696 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 CCNL2Q96S94 520 aaPredicted RBP9.33□□□□□ -0.92
SNX11-205ENST00000578861 CGRRF1Q99675 332 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 MED10Q9BTT4 135 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 C6orf106Q9H6K1 298 aaPredicted RBP9.33□□□□□ -0.92
SNX11-205ENST00000578861 POLR1BQ9H9Y6 1135 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 KIAA1586Q9HCI6 787 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 AGPAT3Q9NRZ7 376 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
SNX11-205ENST00000578861 CHORDC1Q9UHD1 332 aaPredicted RBP9.33□□□□□ -0.92
SNX11-205ENST00000578861 MTMR6Q9Y217 621 aa9.33□□□□□ -0.92
SNX11-205ENST00000578861 TGFB1I1O43294 461 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 COCHO43405 550 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 TACC1O75410 805 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 AGFG2O95081 481 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 GJB6O95452 261 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 OLFM2O95897 454 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 IRF1P10914 325 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 CASP1P29466 404 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 CTSKP43235 329 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 CDH8P55286 799 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 PSMD6Q15008 389 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 FUT11Q495W5 492 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
SNX11-205ENST00000578861 GRAMD4Q6IC98 578 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 SCARA5Q6ZMJ2 495 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 EPM2AIP1Q7L775 607 aaPredicted RBP9.32□□□□□ -0.92
SNX11-205ENST00000578861 DDX42Q86XP3 938 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNX11-205ENST00000578861 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 CACTIN-AS1Q8N1I8 211 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 TERB1Q8NA31 727 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 XXYLT1Q8NBI6 393 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 B3GALNT2Q8NCR0 500 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 SCAMP5Q8TAC9 235 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
SNX11-205ENST00000578861 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 FBXO32Q969P5 355 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 SIPA1Q96FS4 1042 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 KCNK16Q96T55 309 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 ACE2Q9BYF1 805 aaPredicted RBP9.32□□□□□ -0.92
SNX11-205ENST00000578861 TRIM9Q9C026 710 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 ELOVL4Q9GZR5 314 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 SLC25A18Q9H1K4 315 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 OSBPL2Q9H1P3 480 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 TNMDQ9H2S6 317 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 SMYD3Q9H7B4 428 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 CD248Q9HCU0 757 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 KBTBD4Q9NVX7 518 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 USP36Q9P275 1121 aaKnown RBP9.32□□□□□ -0.92
SNX11-205ENST00000578861 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 NBASA2RRP1 2371 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 CENPEQ02224 2701 aa9.32□□□□□ -0.92
SNX11-205ENST00000578861 LRBAP50851 2863 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 TLN1Q9Y490 2541 aaKnown RBP9.31□□□□□ -0.92
SNX11-205ENST00000578861 EIF3DO15371 548 aaKnown RBP eCLIP9.31□□□□□ -0.92
SNX11-205ENST00000578861 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
SNX11-205ENST00000578861 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
SNX11-205ENST00000578861 COL8A1P27658 744 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 CASP4P49662 377 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 E2F1Q01094 437 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 AMPD3Q01432 767 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 BIRC3Q13489 604 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 E2F4Q16254 413 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 C3orf38Q5JPI3 329 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 FAM26FQ5R3K3 315 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 HECTD3Q5T447 861 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 TMPRSS6Q8IU80 811 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 RFFLQ8WZ73 363 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 PRCCQ92733 491 aaPredicted RBP9.31□□□□□ -0.92
SNX11-205ENST00000578861 WBP2Q969T9 261 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 SGF29Q96ES7 293 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 ELF4Q99607 663 aaPredicted RBP9.31□□□□□ -0.92
SNX11-205ENST00000578861 GABRG3Q99928 467 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
SNX11-205ENST00000578861 NACA2Q9H009 215 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 BLZF1Q9H2G9 400 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 CCSER2Q9H7U1 834 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 ASCL3Q9NQ33 180 aa9.31□□□□□ -0.92
SNX11-205ENST00000578861 DNAJC17Q9NVM6 304 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms