RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RING1Q06587 406 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 GRM2Q14416 872 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ACAP1Q15027 740 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ZNF77Q15935 545 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 BRMS1LQ5PSV4 323 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
IFT20-207ENST00000578547 ZNF662Q6ZS27 426 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 MTSS1LQ765P7 747 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ZDHHC14Q8IZN3 488 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
IFT20-207ENST00000578547 CCDC185Q8N715 623 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 RSAD2Q8WXG1 361 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 FGF14Q92915 247 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 SLC39A13Q96H72 371 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
IFT20-207ENST00000578547 LRRC3BQ96PB8 259 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ALS2CR12Q96Q35 445 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 PEBP4Q96S96 227 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
IFT20-207ENST00000578547 IRX2Q9BZI1 471 aaPredicted RBP12.6□□□□□ -0.39
IFT20-207ENST00000578547 PLA2G2FQ9BZM2 168 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.6□□□□□ -0.39
IFT20-207ENST00000578547 GPATCH2LQ9NWQ4 482 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 XPO7Q9UIA9 1087 aaKnown RBP12.6□□□□□ -0.39
IFT20-207ENST00000578547 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ZKSCAN5Q9Y2L8 839 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 NUMBLQ9Y6R0 609 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 GOLGA6L9A6NEM1 432 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 PAGE1O75459 146 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 KLKB1P03952 638 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 PCK1P35558 622 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 SLC11A2P49281 568 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 VCPP55072 806 aaKnown RBP12.59□□□□□ -0.39
IFT20-207ENST00000578547 TAS2R40P59535 323 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 EIF4EBP2Q13542 120 aaPredicted RBP12.59□□□□□ -0.39
IFT20-207ENST00000578547 HTR4Q13639 388 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 PPP2R5DQ14738 602 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 HADHQ16836 314 aaKnown RBP12.59□□□□□ -0.39
IFT20-207ENST00000578547 SMTNL2Q2TAL5 461 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 ARL13BQ3SXY8 428 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 ZFYVE27Q5T4F4 411 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 VITQ6UXI7 678 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 UNC45BQ8IWX7 931 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 YAF2Q8IY57 180 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 ATP6V0D2Q8N8Y2 350 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 LRRC57Q8N9N7 239 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 BPIFB1Q8TDL5 484 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 HSPH1Q92598 858 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 DCLK3Q9C098 648 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 KLHL11Q9NVR0 708 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 ARHGEF38Q9NXL2 777 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 SLC12A6Q9UHW9 1150 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 AGO1Q9UL18 857 aaKnown RBP12.59□□□□□ -0.39
IFT20-207ENST00000578547 SNX10Q9Y5X0 201 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 ALG6Q9Y672 507 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
IFT20-207ENST00000578547 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 KCNU1A8MYU2 1149 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 I6L893 689 aaPredicted RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 KIF5CO60282 957 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 GREM1O60565 184 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 ECI2O75521 394 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 IL1R2P27930 398 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 ADRA1BP35368 520 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 SLC1A1P43005 524 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 IFNAR2P48551 515 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 DNA2P51530 1060 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 KCNT1Q5JUK3 1230 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 RAP1GAP2Q684P5 730 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 PEX26Q7Z412 305 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 SLFN11Q7Z7L1 901 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 CHSY1Q86X52 802 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 BBS7Q8IWZ6 715 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 SYCE1Q8N0S2 351 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 ELSPBP1Q96BH3 223 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 ZFYVE19Q96K21 471 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 BTN2A3PQ96KV6 586 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 SNRNP25Q9BV90 132 aaKnown RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 SIK2Q9H0K1 926 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 DHX35Q9H5Z1 703 aaKnown RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 KCNK12Q9HB15 430 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 CD320Q9NPF0 282 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 PACSIN2Q9UNF0 486 aaPredicted RBP12.58□□□□□ -0.4
IFT20-207ENST00000578547 AP4E1Q9UPM8 1137 aa12.58□□□□□ -0.4
IFT20-207ENST00000578547 GOLGA6L7A0A1B0GV03 622 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 TRDMT1O14717 391 aaKnown RBP12.57□□□□□ -0.4
IFT20-207ENST00000578547 ACSL4O60488 711 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 ASGR2P07307 311 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms