RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 MTFR1Q15390 333 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 TAC4Q86UU9 113 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 TDRPQ86YL5 185 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 HTR3CQ8WXA8 447 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 WDR83Q9BRX9 315 aaKnown RBP28.62■■■□□ 2.17
LIMD2-203ENST00000578067 RABEP2Q9H5N1 569 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 ADAM28Q9UKQ2 775 aa28.62■■■□□ 2.17
LIMD2-203ENST00000578067 PQBP1O60828 265 aaKnown RBP28.61■■■□□ 2.17
LIMD2-203ENST00000578067 CHN1P15882 459 aa28.61■■■□□ 2.17
LIMD2-203ENST00000578067 TSHRP16473 764 aa28.61■■■□□ 2.17
LIMD2-203ENST00000578067 YWHAGP61981 247 aaKnown RBP eCLIP28.61■■■□□ 2.17
LIMD2-203ENST00000578067 NFE2Q16621 373 aaPredicted RBP28.61■■■□□ 2.17
LIMD2-203ENST00000578067 VARS2Q5ST30 1063 aaKnown RBP28.61■■■□□ 2.17
LIMD2-203ENST00000578067 CYP4X1Q8N118 509 aa28.61■■■□□ 2.17
LIMD2-203ENST00000578067 DQX1Q8TE96 717 aaKnown RBP28.61■■■□□ 2.17
LIMD2-203ENST00000578067 PPCSQ9HAB8 311 aa28.61■■■□□ 2.17
LIMD2-203ENST00000578067 ABI2Q9NYB9 513 aaPredicted RBP28.61■■■□□ 2.17
LIMD2-203ENST00000578067 TBK1Q9UHD2 729 aa28.61■■■□□ 2.17
LIMD2-203ENST00000578067 OGDHLQ9ULD0 1010 aa28.61■■■□□ 2.17
LIMD2-203ENST00000578067 AMHP03971 560 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 HNRNPH2P55795 449 aaKnown RBP28.6■■■□□ 2.17
LIMD2-203ENST00000578067 TPI1P60174 286 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 SYCP2LQ5T4T6 812 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 FAXCQ5TGI0 409 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 SCN4BQ8IWT1 228 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 PALM2Q8IXS6 379 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 VPS52Q8N1B4 723 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 FUBP3Q96I24 572 aaKnown RBP eCLIP28.6■■■□□ 2.17
LIMD2-203ENST00000578067 TKTL2Q9H0I9 626 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 PPANQ9NQ55 473 aaKnown RBP28.6■■■□□ 2.17
LIMD2-203ENST00000578067 ABCC13Q9NSE7 274 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 PATJQ8NI35 1801 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 GCAP28676 217 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 GATMP50440 423 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 ZNF135P52742 658 aaPredicted RBP28.6■■■□□ 2.17
LIMD2-203ENST00000578067 IFRD2Q12894 506 aaPredicted RBP28.6■■■□□ 2.17
LIMD2-203ENST00000578067 PDK1Q15118 436 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 TCTN1Q2MV58 587 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 ZNF784Q8NCA9 323 aaPredicted RBP28.6■■■□□ 2.17
LIMD2-203ENST00000578067 LGMNQ99538 433 aa28.6■■■□□ 2.17
LIMD2-203ENST00000578067 METTL18O95568 372 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 ALDH2P05091 517 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 VAV1P15498 845 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 ERCC2P18074 760 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 SSTR1P30872 391 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 MTM1Q13496 603 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 PRKD1Q15139 912 aaPredicted RBP28.59■■■□□ 2.17
LIMD2-203ENST00000578067 BTBD8Q5XKL5 378 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 C3orf62Q6ZUJ4 267 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 PDZD4Q76G19 769 aaPredicted RBP28.59■■■□□ 2.17
LIMD2-203ENST00000578067 CEP350Q5VT06 3117 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 POC1B-GALNT4F8VUJ3 575 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 IGLV3-25P01717 112 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 SEC24CP53992 1094 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 FAM171A1Q5VUB5 890 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 ARHGEF18Q6ZSZ5 1173 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 TADA2BQ86TJ2 420 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 FERMT1Q9BQL6 677 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 RABGEF1Q9UJ41 708 aa28.59■■■□□ 2.17
LIMD2-203ENST00000578067 HOXA2O43364 376 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 APRTP07741 180 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 ATP2A2P16615 1042 aaKnown RBP28.58■■■□□ 2.17
LIMD2-203ENST00000578067 ELK3P41970 407 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 GLUD2P49448 558 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 CTXN3Q4LDR2 81 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 FOXR1Q6PIV2 292 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 VSTM1Q6UX27 236 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 CEP57Q86XR8 500 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 MCUQ8NE86 351 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 MAML1Q92585 1016 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 RNF34Q969K3 372 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 XPO6Q96QU8 1125 aaKnown RBP28.58■■■□□ 2.17
LIMD2-203ENST00000578067 RNF208Q9H0X6 261 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 SLC24A2Q9UI40 661 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 TEX264Q9Y6I9 313 aa28.58■■■□□ 2.17
LIMD2-203ENST00000578067 A0A0A0MRY4 1105 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 NDUFAB1O14561 156 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 PPP1R12AO14974 1030 aaPredicted RBP28.57■■■□□ 2.16
LIMD2-203ENST00000578067 MRPL58Q14197 206 aaKnown RBP28.57■■■□□ 2.16
LIMD2-203ENST00000578067 TMED2Q15363 201 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 ANKRD20A2Q5SQ80 823 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 ANKRD20A1Q5TYW2 823 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 ANKRD20A3Q5VUR7 823 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 NLRP14Q86W24 1093 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 SPATA13Q96N96 652 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 EPAS1Q99814 870 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 OR12D3Q9UGF7 316 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 FETUBQ9UGM5 382 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 CHMP2BQ9UQN3 213 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 ACTL7BQ9Y614 415 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 RAD54BQ9Y620 910 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 GMNCA6NCL1 334 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 STK10O94804 968 aaKnown RBP28.57■■■□□ 2.16
LIMD2-203ENST00000578067 CCL5P13501 91 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 AP1B1Q10567 949 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 EIF4EBP2Q13542 120 aaPredicted RBP28.57■■■□□ 2.16
LIMD2-203ENST00000578067 RASA2Q15283 850 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 NPAS4Q8IUM7 802 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 CRIPAKQ8N1N5 446 aa28.57■■■□□ 2.16
LIMD2-203ENST00000578067 SCLYQ96I15 445 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms