RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
CUEDC1-207ENST00000577840 OBSL1O75147 1896 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 C2orf78A6NCI8 922 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 SRGAP2O75044 1071 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 HMBSP08397 361 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 CDH6P55285 790 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 RING1Q06587 406 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 CKAP4Q07065 602 aaKnown RBP16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 ADAM15Q13444 863 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 ATP13A4Q4VNC1 1196 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 GPR158Q5T848 1215 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 TXNRD3NBQ6F5E7 133 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 EP400NLQ6ZTU2 488 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 CCDC185Q8N715 623 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 MAB21L3Q8N8X9 362 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 RNF25Q96BH1 459 aaPredicted RBP16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 PLD4Q96BZ4 506 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 MAK16Q9BXY0 300 aaKnown RBP16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 KLHL11Q9NVR0 708 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 ARHGEF38Q9NXL2 777 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 MRPS23Q9Y3D9 190 aaKnown RBP16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 DENND4CQ5VZ89 1909 aa16.01■□□□□ 0.15
CUEDC1-207ENST00000577840 PAPLNO95428 1278 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 GLP2RO95838 553 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 CKMP06732 381 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 PYGMP11217 842 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 GJA1P17302 382 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 KDELR1P24390 212 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 AVPR1AP37288 418 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 ARL4AP40617 200 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 HARS2P49590 506 aaKnown RBP16■□□□□ 0.15
CUEDC1-207ENST00000577840 ZNF135P52742 658 aaPredicted RBP16■□□□□ 0.15
CUEDC1-207ENST00000577840 ITIH3Q06033 890 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 SCAPQ12770 1279 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 ZNF211Q13398 564 aaPredicted RBP16■□□□□ 0.15
CUEDC1-207ENST00000577840 EIF4EBP2Q13542 120 aaPredicted RBP16■□□□□ 0.15
CUEDC1-207ENST00000577840 WHAMMP3Q1A5X7 153 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 CES5AQ6NT32 575 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 MICALL1Q8N3F8 863 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 ARL14EPQ8N8R7 260 aaPredicted RBP16■□□□□ 0.15
CUEDC1-207ENST00000577840 SHKBP1Q8TBC3 707 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 MAIP1Q8WWC4 291 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 SLC39A13Q96H72 371 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 CAPZA3Q96KX2 299 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 FCRL2Q96LA5 508 aaPredicted RBP16■□□□□ 0.15
CUEDC1-207ENST00000577840 HAPLN3Q96S86 360 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 CALN1Q9BXU9 219 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 TASP1Q9H6P5 420 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 GPATCH2LQ9NWQ4 482 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 CLDND1Q9NY35 253 aa16■□□□□ 0.15
CUEDC1-207ENST00000577840 PI4K2BG5E9Z4 385 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 LINC01565O15544 149 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 OLFM2O95897 454 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 MOCS2O96007 188 aaPredicted RBP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 NTHL1P78549 312 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 TEAD2Q15562 447 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 DPYSL2Q16555 572 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 TFDP3Q5H9I0 405 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 PPP6R3Q5H9R7 873 aaPredicted RBP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 PRSS36Q5K4E3 855 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 ATAT1Q5SQI0 421 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 DCAF12L1Q5VU92 463 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 SPOCD1Q6ZMY3 1216 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 CYP4V2Q6ZWL3 525 aaPredicted RBP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 GPR149Q86SP6 731 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 VSIG1Q86XK7 387 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 DDX42Q86XP3 938 aaKnown RBP eCLIP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 ACTRT1Q8TDG2 376 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 COG1Q8WTW3 980 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 RAPGEF5Q92565 580 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 ACSF2Q96CM8 615 aaPredicted RBP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 TCEAL4Q96EI5 215 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 BTN2A3PQ96KV6 586 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 APOL5Q9BWW9 433 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 KLF16Q9BXK1 252 aaPredicted RBP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 DCLK3Q9C098 648 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 RNF38Q9H0F5 515 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 OSBPL2Q9H1P3 480 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 C11orf16Q9NQ32 467 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 LSM7Q9UK45 103 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 MRFAP1Q9Y605 127 aa15.99■□□□□ 0.15
CUEDC1-207ENST00000577840 H3BRJ5 948 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 PGRMC1O00264 195 aaKnown RBP15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 ZNF185O15231 689 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 DAPK3O43293 454 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 FSHRP23945 695 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 CCR2P41597 374 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 SLC11A2P49281 568 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 SLC7A9P82251 487 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 PPP2R5EQ16537 467 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 LONRF2Q1L5Z9 754 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 RASGEF1CQ8N431 466 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 MNS1Q8NEH6 495 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 RIPOR3Q96MK2 946 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 CYP2S1Q96SQ9 504 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 EPAS1Q99814 870 aa15.98■□□□□ 0.15
CUEDC1-207ENST00000577840 ZNF670Q9BS34 389 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms