RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 GTF3C4Q9UKN8 822 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 MTA2O94776 668 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 ZNF806P0C7X5 589 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TOB2Q14106 344 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 DEFB128Q7Z7B8 93 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 AMIGO1Q86WK6 493 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TMEM237Q96Q45 408 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 GPER1Q99527 375 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 THUMPD3Q9BV44 507 aaKnown RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 DDX47Q9H0S4 455 aaKnown RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 SAR1AQ9NR31 198 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 IFT172Q9UG01 1749 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 CDK5RAP2Q96SN8 1893 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 NCF1BA6NI72 391 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 NCF1CA8MVU1 366 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 NCF1P14598 390 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 RAG1P15918 1043 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TBX2Q13207 712 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 FAM26FQ5R3K3 315 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 PDZK1Q5T2W1 519 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 IKBIPQ70UQ0 350 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 IFNL3Q8IZI9 196 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 CHID1Q9BWS9 393 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 RNF121Q9H920 327 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 SHOC2Q9UQ13 582 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 KNTC1P50748 2209 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 FKBP6O75344 327 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 DNTTP04053 509 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 SERPING1P05155 500 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 FGFR4P22455 802 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 LGALS3BPQ08380 585 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 FAM96AQ9H5X1 160 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 DAPK2Q9UIK4 370 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 DAGLAQ9Y4D2 1042 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 MYO5AQ9Y4I1 1855 aaKnown RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 A0A096LPK6 155 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 FGAP02671 866 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 KLRC2P26717 231 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 RPL19P84098 196 aaKnown RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 STX5Q13190 355 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 PLD1Q13393 1074 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TTLL6Q8N841 843 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 ZSCAN1Q8NBB4 408 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 FAM167AQ96KS9 214 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TRNT1Q96Q11 434 aaKnown RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 GDF3Q9NR23 364 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 DNMT3LQ9UJW3 386 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 ERVK-7P63135 1459 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 MROH7Q68CQ1 1323 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 GLI1P08151 1106 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 ERFP50548 548 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 RAB25P57735 213 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 ZNF658Q5TYW1 1059 aaPredicted RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 PRR23BQ6ZRT6 265 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
CDH8-203ENST00000577390 SNX27Q96L92 541 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 OSBPL7Q9BZF2 842 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 HMG20AQ9NP66 347 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 TRPV5Q9NQA5 729 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 DPP7Q9UHL4 492 aa9.06□□□□□ -0.96
CDH8-203ENST00000577390 PDS5AQ29RF7 1337 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 A0A0X1KG70 313 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 C3orf70A6NLC5 250 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 APOL1O14791 398 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 HALP42357 657 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 GYG1P46976 350 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 KCNMA1Q12791 1236 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 DGKDQ16760 1214 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 TMC3Q7Z5M5 1100 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 DPY30Q9C005 99 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 KIAA1683Q9H0B3 1180 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 FAM187AA6NFU0 413 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 OR10H2O60403 315 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 MASP1P48740 699 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 TTLL9Q3SXZ7 439 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 SNRNP48Q6IEG0 339 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 DOK6Q6PKX4 331 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 ULK2Q8IYT8 1036 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 AK8Q96MA6 479 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 ZNF302Q9NR11 478 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 LRRC42Q9Y546 428 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 SF3B1O75533 1304 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDH8-203ENST00000577390 C15orf38-AP3S2A0A0A6YYH1 394 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 E2F8A0AVK6 867 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 CLK2P49760 499 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 CAPZA1P52907 286 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 DRG2P55039 364 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 ARPINQ7Z6K5 226 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 AASDHPPTQ9NRN7 309 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 ABI3Q9P2A4 366 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 LYVE1Q9Y5Y7 322 aa9.05□□□□□ -0.96
CDH8-203ENST00000577390 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 GTPBP1O00178 669 aaKnown RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 DNALI1O14645 258 aaPredicted RBP9.05□□□□□ -0.96
CDH8-203ENST00000577390 PSMD4P55036 377 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms