RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 ADAT2Q7Z6V5 191 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 UNC93AQ86WB7 457 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 ZNF276Q8N554 614 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 ENGASEQ8NFI3 743 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 DHX58Q96C10 678 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 FCRL3Q96P31 734 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 LRRC27Q9C0I9 530 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 PCED1AQ9H1Q7 454 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 BLZF1Q9H2G9 400 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 TMEM245Q9H330 911 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 EBF2Q9HAK2 575 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 PRSS16Q9NQE7 514 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 PCDHA5Q9Y5H7 936 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 USP3Q9Y6I4 520 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 CKAP5Q14008 2032 aa10.6□□□□□ -0.71
NPLOC4-220ENST00000576940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 SLC12A8A0AV02 714 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 FAM47DPA6NHR8 397 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 ENC1O14682 589 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 LDOC1O95751 146 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 WNT1P04628 370 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 CYBBP04839 570 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 IGHV4-34P06331 123 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 HLA-FP30511 346 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 ASPAP45381 313 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 PSEN1P49768 467 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 AP3M2P53677 418 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 AMPD3Q01432 767 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 EHHADHQ08426 723 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 EIF4HQ15056 248 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 SHBQ15464 509 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 FNDC3BQ53EP0 1204 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 PCSK4Q6UW60 755 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 CCDC186Q7Z3E2 898 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 TADA2BQ86TJ2 420 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 C12orf56Q8IXR9 622 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 NDRG1Q92597 394 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 NXPE2Q96DL1 559 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 CNDP2Q96KP4 475 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 SLC6A18Q96N87 628 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 ARID3AQ99856 593 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 C7orf25Q9BPX7 421 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 SLC2A11Q9BYW1 496 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 DCLK3Q9C098 648 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 MTG2Q9H4K7 406 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 CLIC5Q9NZA1 410 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 TFIP11Q9UBB9 837 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 PLA2G4CQ9UP65 541 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 PCDHGA1Q9Y5H4 931 aa10.59□□□□□ -0.71
NPLOC4-220ENST00000576940 WNT9AO14904 365 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 RRP8O43159 456 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 DNTTP04053 509 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 ITGAVP06756 1048 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 P4HA1P13674 534 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 BCAT1P54687 386 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 C21orf59P57076 290 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 BNIP3Q12983 259 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 E2F5Q15329 346 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 KNOP1Q1ED39 458 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 ZACNQ401N2 412 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 UNC13DQ70J99 1090 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 SV2AQ7L0J3 742 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 CHST9Q7L1S5 443 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 GPR155Q7Z3F1 870 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 ADIPOR2Q86V24 386 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 ZC3H3Q8IXZ2 948 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 CPXM2Q8N436 756 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 EID2Q8N6I1 236 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 ELF4Q99607 663 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 NT5C1AQ9BXI3 368 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 PNPLA8Q9NP80 782 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 MARCH2Q9P0N8 246 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
NPLOC4-220ENST00000576940 ZNF462Q96JM2 2506 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 TENM4Q6N022 2769 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 MGAQ8IWI9 3026 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 VILLO15195 856 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 PAPSS1O43252 624 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 STX6O43752 255 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 DFNA5O60443 496 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 RFPL3O75679 317 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 ASS1P00966 412 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 HLA-DRAP01903 254 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 RPN1P04843 607 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 C7P10643 843 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CD58P19256 250 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 ABCB4P21439 1286 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 SYT1P21579 422 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 HOXD9P28356 352 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 HNF1BP35680 557 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 RACK1P63244 317 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CFHR1Q03591 330 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CCDC173Q0VFZ6 552 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 RTP5Q14D33 572 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 MPPE1Q53F39 396 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 ZNF394Q53GI3 561 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms