RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TRABD2BA6NFA1 517 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 PDXKO00764 312 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 CD58P19256 250 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 CCT8P50990 548 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 SLC8A3P57103 927 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZNF445P59923 1031 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZBTB16Q05516 673 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 CYP4F3Q08477 520 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 KIF19Q2TAC6 998 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 FNDC3BQ53EP0 1204 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 MPPE1Q53F39 396 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 ADAT2Q7Z6V5 191 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 SCUBE3Q8IX30 993 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 SORCS1Q8WY21 1168 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 PLD4Q96BZ4 506 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 BTBD1Q9H0C5 482 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 C6orf106Q9H6K1 298 aaPredicted RBP12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 TM9SF3Q9HD45 589 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 PLA2G4CQ9UP65 541 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 ANKRD6Q9Y2G4 727 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 MUC22E2RYF6 1773 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 SLC12A8A0AV02 714 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 E9PAM4 449 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 PCDHGA12O60330 932 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 DFNA5O60443 496 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 SEMA4FO95754 770 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 DNTTP04053 509 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 ACSL1P33121 698 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 ME1P48163 572 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 HARS2P49590 506 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 VAMP7P51809 220 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 YWHAGP61981 247 aaKnown RBP eCLIP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 PDE4CQ08493 712 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 STK4Q13043 487 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 SMAD1Q15797 465 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 TTC31Q49AM3 519 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 CCDC157Q569K6 752 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMEM215Q68D42 235 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 FAM217AQ8IXS0 508 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 KIAA0895Q8NCT3 520 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 WFIKKN2Q8TEU8 576 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 BIRC7Q96CA5 298 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMEM245Q9H330 911 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 KCTD10Q9H3F6 313 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 FTSJ1Q9UET6 329 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 BTBD3Q9Y2F9 522 aa12.18□□□□□ -0.46
CTDNEP1-212ENST00000576613 FAM149AA5PLN7 773 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 MAPK13O15264 365 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 CALUO43852 315 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 C7P10643 843 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 HLA-EP13747 358 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 CD27P26842 260 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 HOXD9P28356 352 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 BCAT1P54687 386 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 PTPRNQ16849 979 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 C1orf220Q5T0J3 134 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 RESP18Q5W5W9 173 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 TAS1R2Q8TE23 839 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 GOLGA1Q92805 767 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 HEXIM2Q96MH2 286 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 ARID3AQ99856 593 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 UBXN6Q9BZV1 441 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 APOBEC3GQ9HC16 384 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 SLCO1B1Q9Y6L6 691 aa12.17□□□□□ -0.46
CTDNEP1-212ENST00000576613 COL5A1P20908 1838 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 TP53BP1Q12888 1972 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 URB1O60287 2271 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 KLRC4O43908 158 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 TSPAN3O60637 253 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 FSBPO95073 299 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 KRT13P13646 458 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 PDIA4P13667 645 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 HLA-FP30511 346 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 HNF1BP35680 557 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 ABCG1P45844 678 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 GCLMP48507 274 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 C21orf59P57076 290 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 ENPEPQ07075 957 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 DHRS13Q6UX07 377 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 CHST9Q7L1S5 443 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 PIGZQ86VD9 579 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms