RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 PASD1Q8IV76 773 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 HJURPQ8NCD3 748 aaPredicted RBP14.39□□□□□ -0.11
NDE1-211ENST00000576502 C1orf131Q8NDD1 294 aaKnown RBP14.39□□□□□ -0.11
NDE1-211ENST00000576502 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 PCMTD1Q96MG8 357 aaPredicted RBP14.39□□□□□ -0.11
NDE1-211ENST00000576502 VPS16Q9H269 839 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 ACP6Q9NPH0 428 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 FANCLQ9NW38 375 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 FHOD1Q9Y613 1164 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 EML5Q05BV3 1969 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 USP34Q70CQ2 3546 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 MYO15AQ9UKN7 3530 aa14.39□□□□□ -0.11
NDE1-211ENST00000576502 MAP3K13O43283 966 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 ADAM23O75077 832 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 GABBR2O75899 941 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 EPN2O95208 641 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 LSM8O95777 96 aaKnown RBP14.38□□□□□ -0.11
NDE1-211ENST00000576502 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.11
NDE1-211ENST00000576502 CLCN1P35523 988 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 DPP6P42658 865 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 ID4P47928 161 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 SPEM2Q0P670 501 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 KCNMA1Q12791 1236 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 CSRP2Q16527 193 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 EGFLAMQ63HQ2 1017 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 OR6B2Q6IFH4 312 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 TMEM92Q6UXU6 159 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 KBTBD6Q86V97 674 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 SLC47A2Q86VL8 602 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 ZNF677Q86XU0 584 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 SFTPA1Q8IWL2 248 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 MDGA1Q8NFP4 955 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 SPAG5Q96R06 1193 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 TPSD1Q9BZJ3 242 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 FAM204AQ9H8W3 233 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 POLR3BQ9NW08 1133 aaPredicted RBP14.38□□□□□ -0.11
NDE1-211ENST00000576502 RRN3Q9NYV6 651 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 TJP2Q9UDY2 1190 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 NAALADL1Q9UQQ1 740 aa14.38□□□□□ -0.11
NDE1-211ENST00000576502 SMTNL1A8MU46 457 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 PRRT4C9JH25 899 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 F8VZ95 297 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 TRIM24O15164 1050 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 SYNCRIPO60506 623 aaKnown RBP14.37□□□□□ -0.11
NDE1-211ENST00000576502 TSPAN3O60637 253 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 ZNF217O75362 1048 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 TRUB2O95900 331 aaKnown RBP14.37□□□□□ -0.11
NDE1-211ENST00000576502 CYP11B1P15538 503 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 HOXD9P28356 352 aaPredicted RBP14.37□□□□□ -0.11
NDE1-211ENST00000576502 COPB1P53618 953 aaKnown RBP14.37□□□□□ -0.11
NDE1-211ENST00000576502 TYRO3Q06418 890 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 PLK5Q496M5 336 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 DCAF6Q58WW2 860 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 TAC4Q86UU9 113 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 AHI1Q8N157 1196 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 C12orf50Q8NA57 414 aaPredicted RBP14.37□□□□□ -0.11
NDE1-211ENST00000576502 RNF34Q969K3 372 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 BTN2A3PQ96KV6 586 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 CPXM1Q96SM3 734 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 GABRG3Q99928 467 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 CIPCQ9C0C6 399 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 SEMA4GQ9NTN9 838 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.37□□□□□ -0.11
NDE1-211ENST00000576502 ELOVL2Q9NXB9 296 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 LIMA1Q9UHB6 759 aaKnown RBP14.37□□□□□ -0.11
NDE1-211ENST00000576502 CYTH4Q9UIA0 394 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 STAP1Q9ULZ2 295 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 PAXBP1Q9Y5B6 917 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 ZNF292O60281 2723 aa14.37□□□□□ -0.11
NDE1-211ENST00000576502 THADAQ6YHU6 1953 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 LGALS16A8MUM7 142 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 TBL1XO60907 577 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 FYNP06241 537 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 ATP5BP06576 529 aaKnown RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 CHRM1P11229 460 aaPredicted RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 ABCB4P21439 1286 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 CCR1P32246 355 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 SLC6A3Q01959 620 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 UBXN1Q04323 297 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 PUM1Q14671 1186 aaKnown RBP eCLIP14.36□□□□□ -0.114e-6■□□□□ 8.5
NDE1-211ENST00000576502 SYCP1Q15431 976 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 SLC36A4Q6YBV0 504 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 ERICH1Q86X53 443 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 MFN1Q8IWA4 741 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 NEK11Q8NG66 645 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 SLC39A13Q96H72 371 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 PIWIL1Q96J94 861 aaKnown RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 FCRL2Q96LA5 508 aaPredicted RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 NAA15Q9BXJ9 866 aaKnown RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 FAM207AQ9NSI2 230 aaPredicted RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 THAP10Q9P2Z0 257 aaPredicted RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 AJAP1Q9UKB5 411 aaPredicted RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 CDV3Q9UKY7 258 aaKnown RBP14.36□□□□□ -0.11
NDE1-211ENST00000576502 PLA2G4CQ9UP65 541 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 SPTBN4Q9H254 2564 aa14.36□□□□□ -0.11
NDE1-211ENST00000576502 PLXND1Q9Y4D7 1925 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms