RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 IGLV3-27P01718 113 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 NCAM1P13591 858 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 HLA-EP13747 358 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 HLA-FP30511 346 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 GNA15P30679 374 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 HARS2P49590 506 aaKnown RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 NUMBP49757 651 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 IRX4P78413 519 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 TPD52L1Q16890 204 aaPredicted RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 EXOC3L4Q17RC7 722 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 FUT11Q495W5 492 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 PREPLQ4J6C6 727 aaPredicted RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 FAM133BQ5BKY9 247 aaKnown RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 MIIPQ5JXC2 388 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 NADSYN1Q6IA69 706 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 GBP6Q6ZN66 633 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 NUDT18Q6ZVK8 323 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 TRMT11Q7Z4G4 463 aaKnown RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 MLKLQ8NB16 471 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 DQX1Q8TE96 717 aaKnown RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 CYB5D2Q8WUJ1 264 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 FAM149B1Q96BN6 582 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 HSFY1Q96LI6 401 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 CIPCQ9C0C6 399 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 NUP62CLQ9H1M0 184 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 PLCB1Q9NQ66 1216 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 VPS45Q9NRW7 570 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 SAMSN1Q9NSI8 373 aaKnown RBP12.39□□□□□ -0.43
LITAF-219ENST00000576334 APEX2Q9UBZ4 518 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 SLC27A6Q9Y2P4 619 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 PCDHGA5Q9Y5G8 931 aa12.39□□□□□ -0.43
LITAF-219ENST00000576334 IGHV1OR15-9A0A0B4J2B8 117 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 LNP1A1A4G5 178 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 CYBBP04839 570 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 ITPKAP23677 461 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 PRKCHP24723 683 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 RPL34P49207 117 aaKnown RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 TBX4P57082 545 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 ZNF234Q14588 700 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 STILQ15468 1287 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 PPM1JQ5JR12 505 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 STPG1Q5TH74 334 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 KIAA1324Q6UXG2 1013 aaKnown RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 TAC4Q86UU9 113 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 GPT2Q8TD30 523 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 IRGQQ8WZA9 623 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 SHC3Q92529 594 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 TMA16Q96EY4 203 aaKnown RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 MRGPRX1Q96LB2 322 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 SLC4A5Q9BY07 1137 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 MTG2Q9H4K7 406 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 ELOVL2Q9NXB9 296 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 STIM2Q9P246 746 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 THAP10Q9P2Z0 257 aaPredicted RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 DNAJC12Q9UKB3 198 aa12.38□□□□□ -0.43
LITAF-219ENST00000576334 MUC22E2RYF6 1773 aaPredicted RBP12.38□□□□□ -0.43
LITAF-219ENST00000576334 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 FOXN3O00409 490 aaPredicted RBP12.37□□□□□ -0.43
LITAF-219ENST00000576334 TM4SF5O14894 197 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 ACSL4O60488 711 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 TBL1XO60907 577 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 GRAP2O75791 330 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 MOCS2O96007 188 aaPredicted RBP12.37□□□□□ -0.43
LITAF-219ENST00000576334 CD70P32970 193 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 CLCN1P35523 988 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 RPS24P62847 133 aaKnown RBP12.37□□□□□ -0.43
LITAF-219ENST00000576334 FOXK2Q01167 660 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 RPL6Q02878 288 aaKnown RBP12.37□□□□□ -0.43
LITAF-219ENST00000576334 PDCLQ13371 301 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 MAN2A1Q16706 1144 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 MPPE1Q53F39 396 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 PIK3R6Q5UE93 754 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 SDE2Q6IQ49 451 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 LPCAT2Q7L5N7 544 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 ANKS1BQ7Z6G8 1248 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 SLC41A1Q8IVJ1 513 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 CFAP52Q8N1V2 620 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 SPACA7Q96KW9 195 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 CPXM1Q96SM3 734 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 TUBGCP2Q9BSJ2 902 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 THAP9Q9H5L6 903 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 CKAP5Q14008 2032 aa12.37□□□□□ -0.43
LITAF-219ENST00000576334 SPEGQ15772 3267 aa12.36□□□□□ -0.43
LITAF-219ENST00000576334 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms