RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 EPHB6O15197 1021 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 ACSL4O60488 711 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 PENKP01210 267 aaPredicted RBP15.86■□□□□ 0.13
SMG6-220ENST00000576218 MMEP08473 750 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 CCDC172P0C7W6 258 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 ABCB4P21439 1286 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 HOXA6P31267 233 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 SLC6A3Q01959 620 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 NME3Q13232 169 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 NNTQ13423 1086 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 FAM102AQ5T9C2 384 aaPredicted RBP15.86■□□□□ 0.13
SMG6-220ENST00000576218 FYB2Q5VWT5 728 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 NAA35Q5VZE5 725 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 ANKS1BQ7Z6G8 1248 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 DEFB106AQ8N104 65 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 PHTF2Q8N3S3 785 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 ATP6V0D2Q8N8Y2 350 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 IL17RCQ8NAC3 791 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 KCNV2Q8TDN2 545 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 NELL1Q92832 810 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 C18orf8Q96DM3 657 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 PIWIL1Q96J94 861 aaKnown RBP15.86■□□□□ 0.13
SMG6-220ENST00000576218 CIPCQ9C0C6 399 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 EPC1Q9H2F5 836 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 DDIT4Q9NX09 232 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 STAP1Q9ULZ2 295 aa15.86■□□□□ 0.13
SMG6-220ENST00000576218 KIAA1549LQ6ZVL6 1849 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 LRRC10BA6NIK2 292 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 GOLGA8SH3BPF8 625 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 IRAK2O43187 625 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 TBL1XO60907 577 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 LILRB5O75023 590 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 DAB1O75553 588 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 RPP40O75818 363 aaKnown RBP15.85■□□□□ 0.13
SMG6-220ENST00000576218 CAVIN2O95810 425 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 FYNP06241 537 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 SLC2A3P11169 496 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 HOXB2P14652 356 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 WASP42768 502 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 CDR2Q01850 454 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 SRSF5Q13243 272 aaKnown RBP15.85■□□□□ 0.13
SMG6-220ENST00000576218 E2F5Q15329 346 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 TAF5Q15542 800 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 CRY1Q16526 586 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 RFWD3Q6PCD5 774 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 OLFML1Q6UWY5 402 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 SND1Q7KZF4 910 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMG6-220ENST00000576218 CHSY1Q86X52 802 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 FAM217AQ8IXS0 508 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 HJURPQ8NCD3 748 aaPredicted RBP15.85■□□□□ 0.13
SMG6-220ENST00000576218 SLC20A1Q8WUM9 679 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 HMGB4Q8WW32 186 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 CPA5Q8WXQ8 436 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 RUBCNQ92622 972 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 FCRL2Q96LA5 508 aaPredicted RBP15.85■□□□□ 0.13
SMG6-220ENST00000576218 SLC2A11Q9BYW1 496 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 TPSD1Q9BZJ3 242 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 HSD3B7Q9H2F3 369 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 STIM2Q9P246 746 aa15.85■□□□□ 0.13
SMG6-220ENST00000576218 A0A0A0MRY4 1105 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 GOLGA6L7A0A1B0GV03 622 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 TCRBV21S2A2A0A5A6 115 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 SGK1O00141 431 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 IGLV3-27P01718 113 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 NTSR1P30989 418 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 KIR2DL1P43626 348 aaPredicted RBP15.84■□□□□ 0.13
SMG6-220ENST00000576218 NSFP46459 744 aaKnown RBP15.84■□□□□ 0.13
SMG6-220ENST00000576218 SULT1E1P49888 294 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 JAM2P57087 298 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 ZSCAN23Q3MJ62 389 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 ZC3H12AQ5D1E8 599 aaKnown RBP15.84■□□□□ 0.13
SMG6-220ENST00000576218 EGFLAMQ63HQ2 1017 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 TRIM72Q6ZMU5 477 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 SLC26A9Q7LBE3 791 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 LUZP1Q86V48 1076 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 MFN1Q8IWA4 741 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 ZNF557Q8N988 423 aaPredicted RBP15.84■□□□□ 0.13
SMG6-220ENST00000576218 ERLEC1Q96DZ1 483 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 SLC2A13Q96QE2 648 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 CBX8Q9HC52 389 aa15.84■□□□□ 0.13
SMG6-220ENST00000576218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMG6-220ENST00000576218 CCDC163A0A0D9SF12 145 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 ANTXRLA6NF34 631 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 PRRT4C9JH25 899 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 F5H5T6 163 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 M0QYT0 321 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 CISD3P0C7P0 127 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 FERP16591 822 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 HOXD9P28356 352 aaPredicted RBP15.83■□□□□ 0.12
SMG6-220ENST00000576218 HOXC13P31276 330 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 CCR1P32246 355 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 CDH5P33151 784 aaPredicted RBP15.83■□□□□ 0.12
SMG6-220ENST00000576218 NOMO3P69849 1222 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 CDH18Q13634 790 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 STARD3Q14849 445 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 USP39Q53GS9 565 aaKnown RBP15.83■□□□□ 0.12
SMG6-220ENST00000576218 RAP1GAP2Q684P5 730 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 LGI2Q8N0V4 545 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 CARNMT1Q8N4J0 409 aa15.83■□□□□ 0.12
SMG6-220ENST00000576218 GAB3Q8WWW8 586 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms