RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 C6orf106Q9H6K1 298 aaPredicted RBP13.67□□□□□ -0.22
TSR1-205ENST00000576202 OSGEPQ9NPF4 335 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 MARCH2Q9P0N8 246 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 SERTAD1Q9UHV2 236 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 PCDHA7Q9UN72 937 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 BTBD3Q9Y2F9 522 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.67□□□□□ -0.22
TSR1-205ENST00000576202 SLCO1B1Q9Y6L6 691 aa13.67□□□□□ -0.22
TSR1-205ENST00000576202 MUC22E2RYF6 1773 aaPredicted RBP13.66□□□□□ -0.22
TSR1-205ENST00000576202 SLC12A8A0AV02 714 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
TSR1-205ENST00000576202 MAPK13O15264 365 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
TSR1-205ENST00000576202 SLFN14P0C7P3 912 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 PDIA4P13667 645 aaKnown RBP13.66□□□□□ -0.22
TSR1-205ENST00000576202 HLA-EP13747 358 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 ACSL1P33121 698 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 GCLMP48507 274 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 YWHAGP61981 247 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSR1-205ENST00000576202 TEAD4Q15561 434 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 KIF19Q2TAC6 998 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 CCDC150Q8NCX0 1101 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 PLD4Q96BZ4 506 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 PAGE5Q96GU1 130 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSR1-205ENST00000576202 TRAF3IP3Q9Y228 551 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 SNX11Q9Y5W9 270 aa13.66□□□□□ -0.22
TSR1-205ENST00000576202 APC2O95996 2303 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 TRABD2BA6NFA1 517 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 TNFSF14O43557 240 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 TRIM49P0CI25 452 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 TRIM49CP0CI26 452 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 C7P10643 843 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 HOXD9P28356 352 aaPredicted RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 GRK6P43250 576 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 GRIA4P48058 902 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 PPP3CAQ08209 521 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 MPPE1Q53F39 396 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 RAB41Q5JT25 222 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 PIGZQ86VD9 579 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 MARCH9Q86YJ5 346 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 IGSF8Q969P0 613 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 BIRC7Q96CA5 298 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 LRIG1Q96JA1 1093 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 HEXIM2Q96MH2 286 aaKnown RBP13.65□□□□□ -0.22
TSR1-205ENST00000576202 ARID3AQ99856 593 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 TM9SF3Q9HD45 589 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 PLA2G4CQ9UP65 541 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 ANKRD6Q9Y2G4 727 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 ACACAQ13085 2346 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 TMEM131Q92545 1883 aa13.65□□□□□ -0.22
TSR1-205ENST00000576202 PCDHGA12O60330 932 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 SEMA4FO95754 770 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 KRT13P13646 458 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 NR2F2P24468 414 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 HLA-FP30511 346 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 CCT8P50990 548 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 TKTL1P51854 596 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 ZBTB16Q05516 673 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 PDE4CQ08493 712 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 CAMK2BQ13554 666 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 TRIP4Q15650 581 aaPredicted RBP13.64□□□□□ -0.23
TSR1-205ENST00000576202 SCUBE3Q8IX30 993 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 TTC39CQ8N584 583 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 ZNF366Q8N895 744 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 ENGASEQ8NFI3 743 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 WFIKKN2Q8TEU8 576 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 TMEM176AQ96HP8 235 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 BBC3Q96PG8 261 aaPredicted RBP13.64□□□□□ -0.23
TSR1-205ENST00000576202 BTBD1Q9H0C5 482 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
TSR1-205ENST00000576202 OLA1Q9NTK5 396 aaKnown RBP13.64□□□□□ -0.23
TSR1-205ENST00000576202 KCNK3O14649 394 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 TSPAN3O60637 253 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 FSBPO95073 299 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 ZBED1O96006 694 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 DNTTP04053 509 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 MYL1P05976 194 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 CD27P26842 260 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 HARS2P49590 506 aaKnown RBP13.63□□□□□ -0.23
TSR1-205ENST00000576202 SLC8A3P57103 927 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 ZNF445P59923 1031 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 RPS14P62263 151 aaKnown RBP13.63□□□□□ -0.23
TSR1-205ENST00000576202 ENPEPQ07075 957 aa13.63□□□□□ -0.23
TSR1-205ENST00000576202 SMAD1Q15797 465 aaKnown RBP13.63□□□□□ -0.23
TSR1-205ENST00000576202 NFIL3Q16649 462 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms