RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TWNKQ96RR1 684 aa10.46□□□□□ -0.73
CALCOCO2-227ENST00000575560 ORAI3Q9BRQ5 295 aa10.46□□□□□ -0.73
CALCOCO2-227ENST00000575560 TMEM245Q9H330 911 aa10.46□□□□□ -0.73
CALCOCO2-227ENST00000575560 PRORYQ9H606 182 aa10.46□□□□□ -0.73
CALCOCO2-227ENST00000575560 CKAP5Q14008 2032 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 PVALEFA0A1B0GWK0 134 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 STX6O43752 255 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CYBBP04839 570 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 RALAP11233 206 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 HLA-EP13747 358 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CD27P26842 260 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 ITPKBP27987 946 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CASP1P29466 404 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 EIF2S3P41091 472 aaKnown RBP10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CTSKP43235 329 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 ABCG1P45844 678 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 VASPP50552 380 aaPredicted RBP10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 SPOPLQ6IQ16 392 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CACUL1Q86Y37 369 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 DENND1CQ8IV53 801 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 LSM14AQ8ND56 463 aaKnown RBP10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 GOLGA5Q8TBA6 731 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 SNX19Q92543 992 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CDK5RAP1Q96SZ6 601 aaKnown RBP10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 DUSP16Q9BY84 665 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 CIPCQ9C0C6 399 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 LHX5Q9H2C1 402 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 SLC39A2Q9NP94 309 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 PCDHGA1Q9Y5H4 931 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 NUMA1Q14980 2115 aa10.45□□□□□ -0.74
CALCOCO2-227ENST00000575560 PLK4O00444 970 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 IKBKBO14920 756 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 ATXN7O15265 892 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 DFNA5O60443 496 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 PPP6R2O75170 966 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 CLSTN1O94985 981 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 SEMA4FO95754 770 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 HMBSP08397 361 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 HOXD9P28356 352 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 HLA-FP30511 346 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 CCT8P50990 548 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 ZBTB16Q05516 673 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 PDE4CQ08493 712 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 EFEMP1Q12805 493 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 C1orf220Q5T0J3 134 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 PPP1R26Q5T8A7 1209 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 SHC4Q6S5L8 630 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 LAYNQ6UX15 382 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 KIAA0907Q7Z7F0 614 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 ENGASEQ8NFI3 743 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 PIP4K2CQ8TBX8 421 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 DDI1Q8WTU0 396 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 NT5C1AQ9BXI3 368 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 BACH2Q9BYV9 841 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 UBXN6Q9BZV1 441 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 BTBD1Q9H0C5 482 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 BLZF1Q9H2G9 400 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 ZSCAN16Q9H4T2 348 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 MARCH2Q9P0N8 246 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 RASAL2Q9UJF2 1139 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 PLA2G4CQ9UP65 541 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 MTMR6Q9Y217 621 aa10.44□□□□□ -0.74
CALCOCO2-227ENST00000575560 A0A1B0GTQ1 180 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 VILLO15195 856 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 SPTLC2O15270 562 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 TLX3O43711 291 aaPredicted RBP10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 IGHV4-34P06331 123 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 C1SP09871 688 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 CDK4P11802 303 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 TRIM21P19474 475 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 RPS14P62263 151 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 STK38Q15208 465 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 TRIP4Q15650 581 aaPredicted RBP10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 INAVAQ3KP66 663 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 MPPE1Q53F39 396 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 CCDC157Q569K6 752 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 RAB41Q5JT25 222 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 ADIPOR2Q86V24 386 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 KCTD10Q9H3F6 313 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 FBRSQ9HAH7 460 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 MAGEF1Q9HAY2 307 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 CYP3A43Q9HB55 503 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 SGK2Q9HBY8 427 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 APOBEC3GQ9HC16 384 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 PRSS16Q9NQE7 514 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 FTSJ1Q9UET6 329 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 STOML2Q9UJZ1 356 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 FARP1Q9Y4F1 1045 aaPredicted RBP10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 RAI2Q9Y5P3 530 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 MYH10P35580 1976 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 SHROOM3Q8TF72 1996 aa10.43□□□□□ -0.74
CALCOCO2-227ENST00000575560 ZNF462Q96JM2 2506 aa10.42□□□□□ -0.74
CALCOCO2-227ENST00000575560 SLC12A8A0AV02 714 aa10.42□□□□□ -0.74
CALCOCO2-227ENST00000575560 C10orf142B7Z368 130 aa10.42□□□□□ -0.74
CALCOCO2-227ENST00000575560 ENC1O14682 589 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms