RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CRELD1Q96HD1 420 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 ELF4Q99607 663 aaPredicted RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 C7orf25Q9BPX7 421 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 NT5C1AQ9BXI3 368 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 IMPG2Q9BZV3 1241 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 MAGEF1Q9HAY2 307 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 NMUR1Q9HB89 426 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 FAM49BQ9NUQ9 324 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 SUN2Q9UH99 717 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 RASAL2Q9UJF2 1139 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 NUDT5Q9UKK9 219 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 AGO1Q9UL18 857 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 TPX2Q9ULW0 747 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 SCML1Q9UN30 329 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 URB1O60287 2271 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 THADAQ6YHU6 1953 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 ADAMTS20P59510 1910 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 TEX15Q9BXT5 2789 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 PTPN13Q12923 2485 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 A0A087X0B3 334 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 A0A1B0GTQ1 180 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 LRRIQ3A6PVS8 624 aaPredicted RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 KCNK3O14649 394 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 IKBKBO14920 756 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 RNASEH1O60930 286 aaKnown RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 C1QL1O75973 258 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 PRB1P04280 392 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 ATP5BP06576 529 aaKnown RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 ITGAVP06756 1048 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 PLA2G2AP14555 144 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 ABCB4P21439 1286 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 ITPKBP27987 946 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 ACTN2P35609 894 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 ARRB1P49407 418 aaPredicted RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 HARS2P49590 506 aaKnown RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 SLC8A3P57103 927 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 EFEMP1Q12805 493 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 RTP5Q14D33 572 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 USP30Q70CQ3 517 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 UNC13DQ70J99 1090 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 GPRIN1Q7Z2K8 1008 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 GPR155Q7Z3F1 870 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 SCD5Q86SK9 330 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 CACUL1Q86Y37 369 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 DENND1CQ8IV53 801 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 CACTIN-AS1Q8N1I8 211 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 SNIP1Q8TAD8 396 aaKnown RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 SORCS1Q8WY21 1168 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 FGF11Q92914 225 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 JAKMIP2Q96AA8 810 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 CNDP2Q96KP4 475 aaKnown RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 FCRL3Q96P31 734 aaPredicted RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 DUSP16Q9BY84 665 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 UBXN6Q9BZV1 441 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 SDCBP2Q9H190 292 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 TMEM245Q9H330 911 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 UPF2Q9HAU5 1272 aaKnown RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 CYP3A43Q9HB55 503 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 MARCH2Q9P0N8 246 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 RAI2Q9Y5P3 530 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 EML5Q05BV3 1969 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
SMG6-218ENST00000575454 USP9XQ93008 2570 aaPredicted RBP9.42□□□□□ -0.9
SMG6-218ENST00000575454 ATG2BQ96BY7 2078 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 COL12A1Q99715 3063 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 PVALEFA0A1B0GWK0 134 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 LRRC72A6NJI9 287 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 KIF20AO95235 890 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 VNN1O95497 513 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 ASS1P00966 412 aaKnown RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 HMBSP08397 361 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 DLDP09622 509 aaKnown RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 ASPAP45381 313 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 CASP4P49662 377 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 RPS14P62263 151 aaKnown RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 INCA1Q0VD86 236 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.98e-9■■■■■ 30
SMG6-218ENST00000575454 E2F4Q16254 413 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 ZACNQ401N2 412 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 TMEM215Q68D42 235 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 ZNF776Q68DI1 518 aaPredicted RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 KIAA0895LQ68EN5 471 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 SLC9A9Q8IVB4 645 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 FAM217AQ8IXS0 508 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 AHI1Q8N157 1196 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 OXR1Q8N573 874 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 TTC39CQ8N584 583 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 CCDC150Q8NCX0 1101 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 GANCQ8TET4 914 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 TMA16Q96EY4 203 aaKnown RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 WBP1Q96G27 269 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 P2RY11Q96G91 374 aa9.41□□□□□ -0.9
SMG6-218ENST00000575454 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 ZSCAN16Q9H4T2 348 aaPredicted RBP9.41□□□□□ -0.9
SMG6-218ENST00000575454 GDF3Q9NR23 364 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms