RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 HAUS6Q7Z4H7 955 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 ERI1Q8IV48 349 aaKnown RBP9.87□□□□□ -0.83
CCDC40-212ENST00000574799 SLC9A9Q8IVB4 645 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 KCTD6Q8NC69 237 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-212ENST00000574799 PIWIL2Q8TC59 973 aaKnown RBP9.87□□□□□ -0.83
CCDC40-212ENST00000574799 SHC3Q92529 594 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 MMP19Q99542 508 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 HAPLN2Q9GZV7 340 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 BRD8Q9H0E9 1235 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 MAN1C1Q9NR34 630 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 RAB6BQ9NRW1 208 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 THAP1Q9NVV9 213 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 MAP3K20Q9NYL2 800 aaKnown RBP9.87□□□□□ -0.83
CCDC40-212ENST00000574799 C6orf203Q9P0P8 240 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-212ENST00000574799 MYRFQ9Y2G1 1151 aa9.87□□□□□ -0.83
CCDC40-212ENST00000574799 CLUHO75153 1309 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GOLGA8QA0A0J9YX86 632 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 HTR3EA5X5Y0 456 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GOLGA8OA6NCC3 632 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GOLGA8NF8WBI6 632 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 HNRNPDLO14979 420 aaKnown RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 STAM2O75886 525 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 ZBTB11O95625 1053 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 RBP3P10745 1247 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 CD19P15391 556 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 EEF1DP29692 281 aaKnown RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GNA15P30679 374 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 PSMC5P62195 406 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 CCNIQ14094 377 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 HNRNPDQ14103 355 aaKnown RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GK3PQ14409 553 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 PTAR1Q7Z6K3 402 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 KATNAL2Q8IYT4 538 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 FEZF2Q8TBJ5 459 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 HSPH1Q92598 858 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GPATCH1Q9BRR8 931 aaKnown RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 PARVAQ9NVD7 372 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 KCND2Q9NZV8 630 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 SLC9A2Q9UBY0 812 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 PCDHB2Q9Y5E7 798 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 C1orf232A0A0U1RR37 186 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 APOEP02649 317 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 APRTP07741 180 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 PSMA2P25787 234 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 GTF2BQ00403 316 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 ITGADQ13349 1161 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 TFDP3Q5H9I0 405 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 ZNF410Q86VK4 478 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 RELL1Q8IUW5 271 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 FBXW8Q8N3Y1 598 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 METTL25Q8N6Q8 603 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 XPNPEP1Q9NQW7 623 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 C20orf96Q9NUD7 363 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 TBCCD1Q9NVR7 557 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 LAMA3Q16787 3333 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 SH3PXD2BA1X283 911 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 DNAJA2O60884 412 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 CCDC130P13994 396 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 YWHABP31946 246 aaKnown RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 TNFAIP1Q13829 316 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 VGLL4Q14135 290 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 MSS51Q4VC12 460 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 VWA5B1Q5TIE3 1220 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 TTC33Q6PID6 262 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 ADGRG6Q86SQ4 1221 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 AHI1Q8N157 1196 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 BHLHE22Q8NFJ8 381 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 C7orf26Q96N11 449 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 RMDN3Q96TC7 470 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 KIFC3Q9BVG8 833 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 OXCT2Q9BYC2 517 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-212ENST00000574799 ZDHHC7Q9NXF8 308 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 PLA2G4CQ9UP65 541 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 HEY1Q9Y5J3 304 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 SNX13Q9Y5W8 968 aa9.86□□□□□ -0.83
CCDC40-212ENST00000574799 TMEM221A6NGB7 291 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 SOCS7O14512 581 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 SIN3BO75182 1162 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 ESRRBO95718 433 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 P4HBP07237 508 aaKnown RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 CDH2P19022 906 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 VARSP26640 1264 aaKnown RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 RELAQ04206 551 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 BNC2Q6ZN30 1099 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 GPC2Q8N158 579 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 SEMA4DQ92854 862 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 GCOM2Q9BZD3 368 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 ST6GALNAC4Q9H4F1 302 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 EPB41L1Q9H4G0 881 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 EHMT1Q9H9B1 1298 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 PPP1R1BQ9UD71 204 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 F5H423 210 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-212ENST00000574799 ITM2AO43736 263 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 AVILO75366 819 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 ADRB2P07550 413 aa9.85□□□□□ -0.83
CCDC40-212ENST00000574799 SLC1A6P48664 564 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms