RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SCINQ9Y6U3 715 aa13.27□□□□□ -0.29
TRAPPC1-206ENST00000573989 NEDD8-MDP1E9PL57 170 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ACSL4O60488 711 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 FLT3P36888 993 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 NUBP1P53384 320 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 TBX2Q13207 712 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 PPP2R5DQ14738 602 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 FBXO43Q4G163 708 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 MPPE1Q53F39 396 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 TMEM196Q5HYL7 178 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 BRMS1LQ5PSV4 323 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 CWF19L1Q69YN2 538 aaKnown RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ALKBH5Q6P6C2 394 aaKnown RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 PHLDB2Q86SQ0 1253 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 TMEM25Q86YD3 366 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 CCDC117Q8IWD4 279 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 FAM217AQ8IXS0 508 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 SYNPOQ8N3V7 929 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ZNF557Q8N988 423 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 DDI1Q8WTU0 396 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 CCDC42Q96M95 316 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 PNKPQ96T60 521 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 NPY6RQ99463 290 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 IER2Q9BTL4 223 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ISCUQ9H1K1 167 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 WDCPQ9H6R7 721 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 MRPL47Q9HD33 250 aaKnown RBP13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 TAS2R14Q9NYV8 317 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 ARHGAP20Q9P2F6 1191 aa13.26□□□□□ -0.29
TRAPPC1-206ENST00000573989 KCNU1A8MYU2 1149 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 AKR1B10O60218 316 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 APODP05090 189 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 PLEKP08567 350 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 TYRP14679 529 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 GPD1P21695 349 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 RRM1P23921 792 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 CDC25BP30305 580 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 AVPR2P30518 371 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 EIF4A3P38919 411 aaKnown RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 PTPN9P43378 593 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 RPS9P46781 194 aaKnown RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 GALK1P51570 392 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 EIF4EBP2Q13542 120 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 SLC18A3Q16572 532 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 ARL13BQ3SXY8 428 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 CCDC122Q5T0U0 273 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 TXNDC11Q6PKC3 985 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 CCDC105Q8IYK2 499 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 ZNF653Q96CK0 615 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 TMA16Q96EY4 203 aaKnown RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 CFAP57Q96MR6 1250 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 TBCBQ99426 244 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 PRRX2Q99811 253 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 LMAN1LQ9HAT1 526 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 DEC1Q9P2X7 70 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 CNOT8Q9UFF9 292 aaKnown RBP13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 KIAA1549LQ6ZVL6 1849 aa13.25□□□□□ -0.29
TRAPPC1-206ENST00000573989 A0A087X0T9 212 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 C2CD4BA6NLJ0 364 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 CACNG3O60359 315 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 ADCY5O95622 1261 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 FAM228BP0C875 321 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 RFC1P35251 1148 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 GRIA2P42262 883 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 CXCR3P49682 368 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 PITX1P78337 314 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 ATP11AP98196 1134 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 CDO1Q16878 200 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 MPP7Q5T2T1 576 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 GRAMD4Q6IC98 578 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 STRADAQ7RTN6 431 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 EMC1Q8N766 993 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 HJURPQ8NCD3 748 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 OLIG1Q8TAK6 271 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 MCEEQ96PE7 176 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 SLC2A11Q9BYW1 496 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 ARHGEF4Q9NR80 690 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 DNAJC17Q9NVM6 304 aaKnown RBP13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 IMPACTQ9P2X3 320 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 KMT2EQ8IZD2 1858 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 COL4A3Q01955 1670 aa13.24□□□□□ -0.29
TRAPPC1-206ENST00000573989 SHISA7A6NL88 538 aa13.23□□□□□ -0.29
TRAPPC1-206ENST00000573989 F5H5T6 163 aa13.23□□□□□ -0.29
TRAPPC1-206ENST00000573989 TSPAN3O60637 253 aa13.23□□□□□ -0.29
TRAPPC1-206ENST00000573989 TULP3O75386 442 aa13.23□□□□□ -0.29
TRAPPC1-206ENST00000573989 ENDOD1O94919 500 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms