RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CPB2Q96IY4 423 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 MAGEB5Q9BZ81 275 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 IFT122Q9HBG6 1241 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 NR2E3Q9Y5X4 410 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 MGAMO43451 1857 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 A6NJR5 290 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 TPP1O14773 563 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 L1CAMP32004 1257 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 RBP5P82980 135 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 PDE1CQ14123 709 aaPredicted RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 RBBP5Q15291 538 aaKnown RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 DBN1Q16643 649 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 RALGPS1Q5JS13 557 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 RABGAP1LQ5R372 815 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 AP1ARQ63HQ0 302 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 HEATR6Q6AI08 1181 aaKnown RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 DPY19L2Q6NUT2 758 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 DENND5BQ6ZUT9 1274 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 PYDC1Q8WXC3 89 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 B3GNT5Q9BYG0 378 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 SSC5DA1L4H1 1573 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 ANK1P16157 1881 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 SIN3BO75182 1162 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 GLRA3O75311 464 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 SEMA5AQ13591 1074 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 AAGABQ6PD74 315 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 TTC30AQ86WT1 665 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 ACMSDQ8TDX5 336 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 DPP3Q9NY33 737 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 PAPSS1O43252 624 aaPredicted RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 PLIN3O60664 434 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 ZFXP17010 805 aaPredicted RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 NR2C2P49116 596 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 COPAP53621 1224 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 ATXN1P54253 815 aaKnown RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 IGBP1P78318 339 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 STILQ15468 1287 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 RAPH1Q70E73 1250 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 TMEM110Q86TL2 294 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 CDKL2Q92772 493 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 TUBGCP5Q96RT8 1024 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 PDZD7Q9H5P4 517 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 STN1Q9H668 368 aaKnown RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 FAM49BQ9NUQ9 324 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 PIH1D1Q9NWS0 290 aaKnown RBP16.12■□□□□ 0.17
NUP88-207ENST00000573584 PIM2Q9P1W9 311 aa16.12■□□□□ 0.17
NUP88-207ENST00000573584 BUD23O43709 281 aaKnown RBP16.11■□□□□ 0.17
NUP88-207ENST00000573584 SNUPNO95149 360 aaKnown RBP16.11■□□□□ 0.17
NUP88-207ENST00000573584 PHKA2P46019 1235 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 EPHB1P54762 984 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 DPYSL2Q16555 572 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 PACS1Q6VY07 963 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 MARK2Q7KZI7 788 aaKnown RBP16.11■□□□□ 0.17
NUP88-207ENST00000573584 ACOT1Q86TX2 421 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 TTC39CQ8N584 583 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 PPP4R1Q8TF05 950 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 ZFAND2BQ8WV99 257 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 CLMNQ96JQ2 1002 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 QKIQ96PU8 341 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■■□ 21.4
NUP88-207ENST00000573584 SLC4A5Q9BY07 1137 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 SPATC1LQ9H0A9 340 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 PNPOQ9NVS9 261 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 DCDC2Q9UHG0 476 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 ITGA11Q9UKX5 1188 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 UTRNP46939 3433 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 A0A087WZ62 844 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 ZNF487B1APH4 448 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 TOMM70O94826 608 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 SERPINE1P05121 402 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
NUP88-207ENST00000573584 ASPHQ12797 758 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 LRRC36Q1X8D7 754 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 STEAP4Q687X5 459 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 ADGRG6Q86SQ4 1221 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 RSPH3Q86UC2 560 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 SESTD1Q86VW0 696 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 C10orf107Q8IVU9 208 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 SLC26A7Q8TE54 656 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 FDXACB1Q9BRP7 624 aaPredicted RBP16.11■□□□□ 0.17
NUP88-207ENST00000573584 TRIM4Q9C037 500 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 SMARCAD1Q9H4L7 1026 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
NUP88-207ENST00000573584 HBP1O60381 514 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 PROCP04070 461 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 IDH3AP50213 366 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 SESN2P58004 480 aaPredicted RBP16.1■□□□□ 0.17
NUP88-207ENST00000573584 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 PCLAFQ15004 111 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 DHDDSQ86SQ9 333 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 RASSF3Q86WH2 238 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 SLC35F5Q8WV83 523 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 DTLQ9NZJ0 730 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 AP4E1Q9UPM8 1137 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms