RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 MRC1P22897 1456 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 MANSC4A6NHS7 340 aaPredicted RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 AQP7P3A6NL99 342 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 LINC01548A6NM66 108 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 AGPSO00116 658 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 PMM2O15305 246 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 INMTO95050 263 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 PRKCBP05771 671 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 ANXA2P07355 339 aaKnown RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 DLDP09622 509 aaKnown RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 NHLRC4P0CG21 123 aaPredicted RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 TSHRP16473 764 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 GKP32189 559 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 MCM5P33992 734 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 CUL4AQ13619 759 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 KCNAB1Q14722 419 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 HSP90AB2PQ58FF8 381 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 CCDC30Q5VVM6 783 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 MTHFD1LQ6UB35 978 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 NAPRTQ6XQN6 538 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 PTF1AQ7RTS3 328 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 RNF152Q8N8N0 203 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 ABHD11Q8NFV4 315 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 PJA1Q8NG27 643 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 CTHRC1Q96CG8 243 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 ZBTB45Q96K62 511 aaPredicted RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 MEIS3Q99687 375 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 DPCDQ9BVM2 203 aaPredicted RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 FAM83DQ9H4H8 585 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 RRAGDQ9NQL2 400 aaPredicted RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 GEMIN8Q9NWZ8 242 aaKnown RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 SH3BP4Q9P0V3 963 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 CCNL1Q9UK58 526 aaPredicted RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 FRMD4BQ9Y2L6 1034 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 PARP4Q9UKK3 1724 aaKnown RBP5.54□□□□□ -1.52
CDC27-215ENST00000573550 PCSK5Q92824 1860 aa5.54□□□□□ -1.52
CDC27-215ENST00000573550 A0A087WZ62 844 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 AP4M1O00189 453 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 PMPCBO75439 489 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 PDE8BO95263 885 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 PARP1P09874 1014 aaKnown RBP5.53□□□□□ -1.52
CDC27-215ENST00000573550 PHKG2P15735 406 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 FPR3P25089 353 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 PRIM2P49643 509 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 PGDP52209 483 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 TIRAPP58753 221 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 PROSER3Q2NL68 480 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 RNASE12Q5GAN4 147 aaKnown RBP5.53□□□□□ -1.52
CDC27-215ENST00000573550 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 KIRREL2Q6UWL6 708 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 SMCR8Q8TEV9 937 aaPredicted RBP5.53□□□□□ -1.52
CDC27-215ENST00000573550 VOPP1Q96AW1 172 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 TRIM44Q96DX7 344 aaPredicted RBP5.53□□□□□ -1.52
CDC27-215ENST00000573550 ZNF668Q96K58 619 aaPredicted RBP5.53□□□□□ -1.52
CDC27-215ENST00000573550 PANK2Q9BZ23 570 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 INO80BQ9C086 356 aaPredicted RBP5.53□□□□□ -1.52
CDC27-215ENST00000573550 LRRCC1Q9C099 1032 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 AS3MTQ9HBK9 375 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 VPS51Q9UID3 782 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 TSPYL4Q9UJ04 414 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 USP22Q9UPT9 525 aa5.53□□□□□ -1.52
CDC27-215ENST00000573550 TRPM3Q9HCF6 1732 aaPredicted RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 POM121BA6NF01 834 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 CGB1A6NKQ9 187 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 PRKCGP05129 697 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 TPM2P07951 284 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 MX1P20591 662 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 MRPS21P82921 87 aaKnown RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 PSG6Q00889 435 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 STK3Q13188 491 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 MTX1Q13505 466 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 TBC1D25Q3MII6 688 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 HSP90AB4PQ58FF6 505 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 KLHDC7AQ5VTJ3 777 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 RNF44Q7L0R7 432 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 ZSCAN30Q86W11 494 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 LIX1LQ8IVB5 337 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 CCAR1Q8IX12 1150 aaKnown RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 SDR16C5Q8N3Y7 309 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 VGLL2Q8N8G2 317 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 SEMA6DQ8NFY4 1073 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 CYP2W1Q8TAV3 490 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 SYAP1Q96A49 352 aaPredicted RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 IQCDQ96DY2 449 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 WDYHV1Q96HA8 205 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 SELENOOQ9BVL4 669 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 ADARB2Q9NS39 739 aaKnown RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 TBC1D23Q9NUY8 699 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 RIMKLBQ9ULI2 386 aa5.52□□□□□ -1.53
CDC27-215ENST00000573550 DDX49Q9Y6V7 483 aaKnown RBP5.52□□□□□ -1.53
CDC27-215ENST00000573550 RAD50Q92878 1312 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 CLCA1A8K7I4 914 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 H7C1Q1 480 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 M0R3H8 397 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 PSMD9O00233 223 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 SPRY2O43597 315 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 GATMP50440 423 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 TBX4P57082 545 aa5.51□□□□□ -1.53
CDC27-215ENST00000573550 SUMO2P61956 95 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms