RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 KCND1Q9NSA2 647 aa14.03□□□□□ -0.16
LINC01996-201ENST00000573270 PACSIN2Q9UNF0 486 aaPredicted RBP14.03□□□□□ -0.16
LINC01996-201ENST00000573270 SH3BP1Q9Y3L3 701 aa14.03□□□□□ -0.16
LINC01996-201ENST00000573270 SNX10Q9Y5X0 201 aa14.03□□□□□ -0.16
LINC01996-201ENST00000573270 TICRRQ7Z2Z1 1910 aa14.03□□□□□ -0.16
LINC01996-201ENST00000573270 KIAA1549LQ6ZVL6 1849 aa14.02□□□□□ -0.16
LINC01996-201ENST00000573270 GREM1O60565 184 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 CCR1P32246 355 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 PCK1P35558 622 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
LINC01996-201ENST00000573270 VCPP55072 806 aaKnown RBP14.02□□□□□ -0.17
LINC01996-201ENST00000573270 COG7P83436 770 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 RING1Q06587 406 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 PPP2R5DQ14738 602 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 ACAP1Q15027 740 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 NUGGCQ68CJ6 796 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 OTOP3Q7RTS5 596 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 CALR3Q96L12 384 aaKnown RBP14.02□□□□□ -0.17
LINC01996-201ENST00000573270 PHF7Q9BWX1 381 aaPredicted RBP14.02□□□□□ -0.17
LINC01996-201ENST00000573270 ARHGEF38Q9NXL2 777 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 EPS15L1Q9UBC2 864 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 LSM7Q9UK45 103 aaKnown RBP14.02□□□□□ -0.17
LINC01996-201ENST00000573270 USP18Q9UMW8 372 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 AP4E1Q9UPM8 1137 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 ALG6Q9Y672 507 aa14.02□□□□□ -0.17
LINC01996-201ENST00000573270 PRPSAP2O60256 369 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 KIF5CO60282 957 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 KLKB1P03952 638 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 KRT1P04264 644 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 LAMP2P13473 410 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 WEE1P30291 646 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 SLC1A1P43005 524 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 DNA2P51530 1060 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 CA9Q16790 459 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 EFHC2Q5JST6 749 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 PIK3R6Q5UE93 754 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 NADSYN1Q6IA69 706 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 PARM1Q6UWI2 310 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 VITQ6UXI7 678 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 Q6ZNB5 142 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 PEX26Q7Z412 305 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 SLFN11Q7Z7L1 901 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 NT5DC3Q86UY8 548 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 CHSY1Q86X52 802 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 DENND1CQ8IV53 801 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 BBS7Q8IWZ6 715 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 SYCE1Q8N0S2 351 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 CELF5Q8N6W0 485 aaKnown RBP14.01□□□□□ -0.17
LINC01996-201ENST00000573270 ATP6V0D2Q8N8Y2 350 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 HSPH1Q92598 858 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 KRT35Q92764 455 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 FGF14Q92915 247 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 NTAN1Q96AB6 310 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 RPGRIP1Q96KN7 1286 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 TRPV4Q9HBA0 871 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC01996-201ENST00000573270 AGO1Q9UL18 857 aaKnown RBP14.01□□□□□ -0.17
LINC01996-201ENST00000573270 FZD10Q9ULW2 581 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 WNT6Q9Y6F9 365 aa14.01□□□□□ -0.17
LINC01996-201ENST00000573270 PRUNE2Q8WUY3 3088 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 HEPACAM2A8MVW5 462 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 KCNU1A8MYU2 1149 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 PSTPIP1O43586 416 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 PAGE1O75459 146 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 TCF3P15923 654 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 HARS2P49590 506 aaKnown RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 HTR4Q13639 388 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 GRM2Q14416 872 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 HADHQ16836 314 aaKnown RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 FAM133BQ5BKY9 247 aaKnown RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 KCNT1Q5JUK3 1230 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 ZNF569Q5MCW4 686 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 DNTTIP2Q5QJE6 756 aaKnown RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 RAP1GAP2Q684P5 730 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 TANGO2Q6ICL3 276 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 UNC45BQ8IWX7 931 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 PYROXD2Q8N2H3 581 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 TRIM58Q8NG06 486 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 CD101Q93033 1021 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 ASIC4Q96FT7 647 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 BTN2A3PQ96KV6 586 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 PRICKLE1Q96MT3 831 aaPredicted RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 LRRC3BQ96PB8 259 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 KCTD15Q96SI1 283 aaPredicted RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 DHX35Q9H5Z1 703 aaKnown RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 ZFP14Q9HCL3 533 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14□□□□□ -0.17
LINC01996-201ENST00000573270 NR2E1Q9Y466 385 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 HS3ST4Q9Y661 456 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 ZFP37Q9Y6Q3 630 aaPredicted RBP14□□□□□ -0.17
LINC01996-201ENST00000573270 NUMBLQ9Y6R0 609 aa14□□□□□ -0.17
LINC01996-201ENST00000573270 GOLGA6L7A0A1B0GV03 622 aa13.99□□□□□ -0.17
LINC01996-201ENST00000573270 E2F8A0AVK6 867 aa13.99□□□□□ -0.17
LINC01996-201ENST00000573270 ACSL4O60488 711 aa13.99□□□□□ -0.17
LINC01996-201ENST00000573270 RARAP10276 462 aa13.99□□□□□ -0.17
LINC01996-201ENST00000573270 SLC2A3P11169 496 aa13.99□□□□□ -0.17
LINC01996-201ENST00000573270 CTNNA1P35221 906 aaKnown RBP13.99□□□□□ -0.17
LINC01996-201ENST00000573270 SLC11A2P49281 568 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms