RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 KRT37O76014 449 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 DDHD2O94830 711 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 HOXD8P13378 290 aaPredicted RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 ATP1A2P50993 1020 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 NAPEPLDQ6IQ20 393 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 GET4Q7L5D6 327 aaPredicted RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 DDX42Q86XP3 938 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMG6-213ENST00000573166 FUKQ8N0W3 1084 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 C2orf15Q8WU43 125 aaKnown RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 PPP1R2P1Q96PQ5 205 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 PPP1R10Q96QC0 940 aaKnown RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 BCO2Q9BYV7 579 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 GPR62Q9BZJ7 368 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 UBXN6Q9BZV1 441 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 TLR9Q9NR96 1032 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 NEU2Q9Y3R4 380 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 AP3B1O00203 1094 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 NBNO60934 754 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 SOD2P04179 222 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 FAM163BP0C2L3 166 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 PTPN2P17706 415 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 PAPOLAP51003 745 aaKnown RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 SCNN1BP51168 640 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 PMS2P54278 862 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 PLEKHA7Q6IQ23 1121 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 SDCCAG8Q86SQ7 713 aaPredicted RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 ACTRT1Q8TDG2 376 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 CEP41Q9BYV8 373 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 FRMD8P1Q9BZ68 369 aaPredicted RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 GPR63Q9BZJ6 419 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 UBA6A0AVT1 1052 aaPredicted RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 TBC1D3BA6NDS4 549 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 PAPSS1O43252 624 aaPredicted RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 TBC1D4O60343 1298 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 GPD2P43304 727 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 GTF2A1P52655 376 aaPredicted RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 ZNF135P52742 658 aaPredicted RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 FAAP100Q0VG06 881 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 TAF5Q15542 800 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 CCNG2Q16589 344 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 C4orf22Q6V702 233 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 CLEC20AQ6ZU45 233 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 KATNAL2Q8IYT4 538 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 PPHLN1Q8NEY8 458 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 FCRL2Q96LA5 508 aaPredicted RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 C9orf72Q96LT7 481 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 SDCBP2Q9H190 292 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 SARS2Q9NP81 518 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 RRP15Q9Y3B9 282 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 NCANO14594 1321 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 PRR23AA6NEV1 266 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 MYO1CO00159 1063 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 PER2O15055 1255 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 CHRNB2P17787 502 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 LRRC38Q5VT99 294 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 FAM43BQ6ZT52 329 aaPredicted RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 MON1BQ7L1V2 547 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 DQX1Q8TE96 717 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 MCRS1Q96EZ8 462 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 ZFATQ9P243 1243 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 SLC38A8A6NNN8 435 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 YJEFN3A6XGL0 299 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 E7ENQ6 273 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 ZNF263O14978 683 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 SPTLC1O15269 473 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 RNF40O75150 1001 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 EDN1P05305 212 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 PCK1P35558 622 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 RENBPP51606 427 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 EIF3BP55884 814 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 WNT7BP56706 349 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 DAOAP59103 153 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 DEFB103AP81534 67 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 RARS2Q5T160 578 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 STRADAQ7RTN6 431 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 MRPL10Q7Z7H8 261 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 CMTR2Q8IYT2 770 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 AFAP1L2Q8N4X5 818 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 ZNF461Q8TAF7 563 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 CFAP97Q9P2B7 532 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 ZC3H7BQ9UGR2 993 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 REXO2Q9Y3B8 237 aaKnown RBP10.42□□□□□ -0.74
SMG6-213ENST00000573166 YIPF1Q9Y548 306 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 ARFGEF1Q9Y6D6 1849 aa10.42□□□□□ -0.74
SMG6-213ENST00000573166 SYNCRIPO60506 623 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 KRT38O76015 456 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 CYP1A1P04798 512 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 TGM2P21980 687 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 ADRA1BP35368 520 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 ITGA8P53708 1063 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 GEMIN4P57678 1058 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 GPR17Q13304 367 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 DNAJB7Q7Z6W7 309 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 MCUQ8NE86 351 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 APOL2Q9BQE5 337 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 UBP1Q9NZI7 540 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FAM8A1Q9UBU6 413 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FBXL21Q9UKT6 434 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms