RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 IRAK2O43187 625 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 KLF8O95600 359 aaPredicted RBP21.49■■□□□ 1.03
CHMP6-204ENST00000572778 APOEP02649 317 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 CISD3P0C7P0 127 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 GBP1P32455 592 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 KIR2DL1P43626 348 aaPredicted RBP21.49■■□□□ 1.03
CHMP6-204ENST00000572778 PXNP49023 591 aaPredicted RBP21.49■■□□□ 1.03
CHMP6-204ENST00000572778 ZNF445P59923 1031 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 FANCCQ00597 558 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 NR1I3Q14994 352 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 ZC3H12AQ5D1E8 599 aaKnown RBP21.49■■□□□ 1.03
CHMP6-204ENST00000572778 FAM102AQ5T9C2 384 aaPredicted RBP21.49■■□□□ 1.03
CHMP6-204ENST00000572778 LONP2Q86WA8 852 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 TXNDC5Q8NBS9 432 aaKnown RBP21.49■■□□□ 1.03
CHMP6-204ENST00000572778 AZIN2Q96A70 460 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 SEMA4AQ9H3S1 761 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 DDIT4Q9NX09 232 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 COX16Q9P0S2 106 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 FBXO10Q9UK96 956 aa21.49■■□□□ 1.03
CHMP6-204ENST00000572778 GOLGA8SH3BPF8 625 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 GFRA3O60609 400 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 DAB1O75553 588 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 IGLV3-25P01717 112 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 NOS2P35228 1153 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 NFKBIBQ15653 356 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 RFWD3Q6PCD5 774 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 TRIM72Q6ZMU5 477 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 XYLT1Q86Y38 959 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 CAMKK1Q8N5S9 505 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 ZNF513Q8N8E2 541 aaPredicted RBP21.48■■□□□ 1.03
CHMP6-204ENST00000572778 IL17RCQ8NAC3 791 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 ZNF397Q8NF99 534 aaPredicted RBP21.48■■□□□ 1.03
CHMP6-204ENST00000572778 RNF34Q969K3 372 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 DDX50Q9BQ39 737 aaKnown RBP21.48■■□□□ 1.03
CHMP6-204ENST00000572778 SEPT11Q9NVA2 429 aaKnown RBP21.48■■□□□ 1.03
CHMP6-204ENST00000572778 CLEC4EQ9ULY5 219 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 MMP17Q9ULZ9 603 aa21.48■■□□□ 1.03
CHMP6-204ENST00000572778 PRR23AA6NEV1 266 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 PRRT4C9JH25 899 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 LMNAP02545 664 aaKnown RBP21.47■■□□□ 1.03
CHMP6-204ENST00000572778 CYP1A1P04798 512 aaPredicted RBP21.47■■□□□ 1.03
CHMP6-204ENST00000572778 CCDC172P0C7W6 258 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 FERP16591 822 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 HOXA6P31267 233 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 SLC6A4P31645 630 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 UBASH3AP57075 661 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 FAM133BQ5BKY9 247 aaKnown RBP21.47■■□□□ 1.03
CHMP6-204ENST00000572778 EOGTQ5NDL2 527 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 NADSYN1Q6IA69 706 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 ASCL5Q7RTU5 278 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 SLC30A5Q8TAD4 765 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 PCDHB18PQ96TA0 734 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 SLC2A11Q9BYW1 496 aa21.47■■□□□ 1.03
CHMP6-204ENST00000572778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHMP6-204ENST00000572778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHMP6-204ENST00000572778 SGK1O00141 431 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 GFRA2O00451 464 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 LILRB5O75023 590 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 HOXD9P28356 352 aaPredicted RBP21.46■■□□□ 1.03
CHMP6-204ENST00000572778 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
CHMP6-204ENST00000572778 SCNN1AP37088 669 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 SGSHP51688 502 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 NME3Q13232 169 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 HSF5Q4G112 596 aaPredicted RBP21.46■■□□□ 1.03
CHMP6-204ENST00000572778 PIK3R6Q5UE93 754 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 MMS22LQ6ZRQ5 1243 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 TRMT11Q7Z4G4 463 aaKnown RBP21.46■■□□□ 1.03
CHMP6-204ENST00000572778 ATP6V0D2Q8N8Y2 350 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 TSTD1Q8NFU3 115 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 KCNV2Q8TDN2 545 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 BAP1Q92560 729 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 AGPAT1Q99943 283 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 SLC12A6Q9UHW9 1150 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 XPO7Q9UIA9 1087 aaKnown RBP21.46■■□□□ 1.03
CHMP6-204ENST00000572778 MYO6Q9UM54 1294 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 SLC27A6Q9Y2P4 619 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 STARD13Q9Y3M8 1113 aa21.46■■□□□ 1.03
CHMP6-204ENST00000572778 MYOFQ9NZM1 2061 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 M0QYT0 321 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 TBL1XO60907 577 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 APBB3O95704 486 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 CHRM1P11229 460 aaPredicted RBP21.45■■□□□ 1.02
CHMP6-204ENST00000572778 CCR1P32246 355 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 MATKP42679 507 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 WASP42768 502 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 NSFP46459 744 aaKnown RBP21.45■■□□□ 1.02
CHMP6-204ENST00000572778 SULT1E1P49888 294 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 CRY1Q16526 586 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 GEN1Q17RS7 908 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 CLEC16AQ2KHT3 1053 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 EGFLAMQ63HQ2 1017 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 PHLDB2Q86SQ0 1253 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 WDR5BQ86VZ2 330 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 BTN2A3PQ96KV6 586 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 C11orf70Q9BRQ4 267 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 NUCKS1Q9H1E3 243 aaKnown RBP21.45■■□□□ 1.02
CHMP6-204ENST00000572778 TSPY26PQ9H489 355 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 RRN3Q9NYV6 651 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 STIM2Q9P246 746 aa21.45■■□□□ 1.02
CHMP6-204ENST00000572778 HCN2Q9UL51 889 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms