RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 TMEM215Q68D42 235 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 ZNF276Q8N554 614 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 ZNF366Q8N895 744 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 CCDC150Q8NCX0 1101 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 RHBDD1Q8TEB9 315 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 PAGE5Q96GU1 130 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 DNAI2Q9GZS0 605 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 LHX5Q9H2C1 402 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 C6orf106Q9H6K1 298 aaPredicted RBP16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 TOR4AQ9NXH8 423 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 BTBD3Q9Y2F9 522 aa16.82■□□□□ 0.28
HCFC1R1-203ENST00000572355 SLFN14P0C7P3 912 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 NR2F2P24468 414 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 ACSL1P33121 698 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 AFF3P51826 1226 aaKnown RBP16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 FNDC3BQ53EP0 1204 aaKnown RBP16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 LAYNQ6UX15 382 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 TMPRSS7Q7RTY8 843 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 ARHGAP18Q8N392 663 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 CPXM2Q8N436 756 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 RBBP8NLQ8NC74 664 aaPredicted RBP16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 CYB5D2Q8WUJ1 264 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 CDC6Q99741 560 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 ARID3AQ99856 593 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 KIAA1522Q9P206 1035 aaPredicted RBP16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 PCDHGB2Q9Y5G2 931 aa16.81■□□□□ 0.28
HCFC1R1-203ENST00000572355 TSPAN3O60637 253 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 KRT13P13646 458 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 HOXD9P28356 352 aaPredicted RBP16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 NUMA1Q14980 2115 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 KIF19Q2TAC6 998 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 PIGZQ86VD9 579 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 C1orf216Q8TAB5 229 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 PLD4Q96BZ4 506 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 LRIG1Q96JA1 1093 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 SNX11Q9Y5W9 270 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 ITPR1Q14643 2758 aa16.8■□□□□ 0.28
HCFC1R1-203ENST00000572355 LOC400499M0QZD8 3231 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 ANKRD11Q6UB99 2663 aaPredicted RBP16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 FAM149AA5PLN7 773 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 TKTL1P51854 596 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 CAMK2GQ13555 558 aaPredicted RBP16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 TEAD4Q15561 434 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 MPPE1Q53F39 396 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 CHST9Q7L1S5 443 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 FAM217AQ8IXS0 508 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 TMEM8AQ9HCN3 771 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 TM9SF3Q9HD45 589 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 TRAF3IP3Q9Y228 551 aa16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.79■□□□□ 0.28
HCFC1R1-203ENST00000572355 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 KCNK3O14649 394 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 MAPK13O15264 365 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 TIMM44O43615 452 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 SEMA4FO95754 770 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 HLA-FP30511 346 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 HARS2P49590 506 aaKnown RBP16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 IL9RQ01113 521 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 DBX2Q6ZNG2 339 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 FMNL3Q8IVF7 1028 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 GALNT15Q8N3T1 639 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 SLC4A11Q8NBS3 891 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 NDRG1Q92597 394 aaKnown RBP16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 TMEM245Q9H330 911 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 CISHQ9NSE2 258 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 ABCB8Q9NUT2 735 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 MAPK8IP1Q9UQF2 711 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 ANKRD6Q9Y2G4 727 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 LAMA5O15230 3695 aa16.78■□□□□ 0.28
HCFC1R1-203ENST00000572355 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 DKK1O94907 266 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 FSBPO95073 299 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 ZBED1O96006 694 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 PFKFB1P16118 471 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 GRIA4P48058 902 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 CCT8P50990 548 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 RAD23BP54727 409 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 SLC8A3P57103 927 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 CYP4F3Q08477 520 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 TRIP4Q15650 581 aaPredicted RBP16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 GOLGA7BQ2TAP0 167 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 RAB41Q5JT25 222 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 ADAT2Q7Z6V5 191 aaKnown RBP16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 WFIKKN2Q8TEU8 576 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 SEMA4DQ92854 862 aa16.77■□□□□ 0.28
HCFC1R1-203ENST00000572355 IGSF8Q969P0 613 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms