RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ABCG1P45844 678 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 GRIA4P48058 902 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 CUL4BQ13620 913 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 KCNT1Q5JUK3 1230 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 SV2AQ7L0J3 742 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 ZNF276Q8N554 614 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 GOLGA5Q8TBA6 731 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 IGSF8Q969P0 613 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 BIRC7Q96CA5 298 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 CABIN1Q9Y6J0 2220 aa20.8■□□□□ 0.92
CCDC40-206ENST00000572083 H0Y8X5 98 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 PLK4O00444 970 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 POLR2DO15514 142 aaKnown RBP20.79■□□□□ 0.92
CCDC40-206ENST00000572083 PPP6R2O75170 966 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 FSBPO95073 299 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 SEMA4FO95754 770 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 AFMP43652 599 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 CAMK2GQ13555 558 aaPredicted RBP20.79■□□□□ 0.92
CCDC40-206ENST00000572083 E2F5Q15329 346 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 FNDC3BQ53EP0 1204 aaKnown RBP20.79■□□□□ 0.92
CCDC40-206ENST00000572083 CYB5D2Q8WUJ1 264 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 ZSCAN16Q9H4T2 348 aaPredicted RBP20.79■□□□□ 0.92
CCDC40-206ENST00000572083 MAGEF1Q9HAY2 307 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 DMAC2Q9NW81 257 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 FTSJ1Q9UET6 329 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 USP3Q9Y6I4 520 aa20.79■□□□□ 0.92
CCDC40-206ENST00000572083 ASXL3Q9C0F0 2248 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 TP53BP1Q12888 1972 aaPredicted RBP20.78■□□□□ 0.92
CCDC40-206ENST00000572083 SLC12A8A0AV02 714 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 CLDN6P56747 220 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 C1orf220Q5T0J3 134 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 PPP1R26Q5T8A7 1209 aaPredicted RBP20.78■□□□□ 0.92
CCDC40-206ENST00000572083 ADAT2Q7Z6V5 191 aaKnown RBP20.78■□□□□ 0.92
CCDC40-206ENST00000572083 GRAMD1CQ8IYS0 662 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 CPXM2Q8N436 756 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 COL26A1Q96A83 441 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 UBL7Q96S82 380 aaPredicted RBP20.78■□□□□ 0.92
CCDC40-206ENST00000572083 DUSP16Q9BY84 665 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 BACH2Q9BYV9 841 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 SLC2A11Q9BYW1 496 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 BTBD1Q9H0C5 482 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 APOBEC3GQ9HC16 384 aaKnown RBP20.78■□□□□ 0.92
CCDC40-206ENST00000572083 FOXD4L1Q9NU39 408 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 MARCH2Q9P0N8 246 aa20.78■□□□□ 0.92
CCDC40-206ENST00000572083 PVALEFA0A1B0GWK0 134 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 PCDHGA12O60330 932 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 TSPAN3O60637 253 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 CUTAO60888 179 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 ITPKBP27987 946 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 HOXD9P28356 352 aaPredicted RBP20.77■□□□□ 0.92
CCDC40-206ENST00000572083 CTSKP43235 329 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 RSRC2Q7L4I2 434 aaKnown RBP20.77■□□□□ 0.92
CCDC40-206ENST00000572083 ENGASEQ8NFI3 743 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 ARID3AQ99856 593 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 IMPG2Q9BZV3 1241 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 TMEM245Q9H330 911 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 OSGEPQ9NPF4 335 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 STRIP2Q9ULQ0 834 aa20.77■□□□□ 0.92
CCDC40-206ENST00000572083 TIMM44O43615 452 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 CD27P26842 260 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 HLA-FP30511 346 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 STK4Q13043 487 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 ZNF394Q53GI3 561 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 CEP135Q66GS9 1140 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 SLC9A9Q8IVB4 645 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 FAM217AQ8IXS0 508 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 KIAA0895Q8NCT3 520 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 TMC2Q8TDI7 906 aa20.76■□□□□ 0.91
CCDC40-206ENST00000572083 PLXNA2O75051 1894 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 C1QL1O75973 258 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 DNTTP04053 509 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 NR3C1P04150 777 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 BCAT1P54687 386 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 YWHAGP61981 247 aaKnown RBP eCLIP20.75■□□□□ 0.91
CCDC40-206ENST00000572083 RPS14P62263 151 aaKnown RBP20.75■□□□□ 0.91
CCDC40-206ENST00000572083 C19orf57Q0VDD7 668 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 INAVAQ3KP66 663 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 CHST9Q7L1S5 443 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 GATAD2AQ86YP4 633 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 TAS1R2Q8TE23 839 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 PLD4Q96BZ4 506 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 NXPE2Q96DL1 559 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 ORAI3Q9BRQ5 295 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 NIF3L1Q9GZT8 377 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 KCTD10Q9H3F6 313 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 CYP3A43Q9HB55 503 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 ABCB8Q9NUT2 735 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 PLA2G4CQ9UP65 541 aa20.75■□□□□ 0.91
CCDC40-206ENST00000572083 E9PAM4 449 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 CBX4O00257 560 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 IKBKBO14920 756 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 TRIM49P0CI25 452 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 TRIM49CP0CI26 452 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 GCLMP48507 274 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 MPPE1Q53F39 396 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 PRAMEF14Q5SWL7 426 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 TMPRSS12Q86WS5 348 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 ZC3H3Q8IXZ2 948 aaKnown RBP20.74■□□□□ 0.91
CCDC40-206ENST00000572083 ARHGAP18Q8N392 663 aa20.74■□□□□ 0.91
CCDC40-206ENST00000572083 SLC39A7Q92504 469 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms