RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 PROB1E7EW31 1015 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 TCERG1O14776 1098 aaKnown RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 FRS3O43559 492 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 TUSC2O75896 110 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 BMP15O95972 392 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ITGB6P18564 788 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 KLRC1P26715 233 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 EPHA3P29320 983 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SLC7A1P30825 629 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 PRKAR1BP31321 381 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 BCAT1P54687 386 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 FAM193AP78312 1265 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SP2Q02086 613 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 DDX10Q13206 875 aaKnown RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 CTBP1Q13363 440 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 CCNIQ14094 377 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 MLC1Q15049 377 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 C11orf87Q6NUJ2 197 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 MIS18BP1Q6P0N0 1132 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 EPM2AIP1Q7L775 607 aaPredicted RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 DEFB132Q7Z7B7 95 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 CHSY1Q86X52 802 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 C8orf58Q8NAV2 365 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ZBTB34Q8NCN2 500 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 PIGOQ8TEQ8 1089 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SMCR8Q8TEV9 937 aaPredicted RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 SPSB4Q96A44 273 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SLC39A13Q96H72 371 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 RITA1Q96K30 269 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 FCRL4Q96PJ5 515 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ARPC5LQ9BPX5 153 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 CIPCQ9C0C6 399 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 PRSS22Q9GZN4 317 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 RSPH9Q9H1X1 276 aaPredicted RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 FAM204AQ9H8W3 233 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ZMAT3Q9HA38 289 aaKnown RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 XPNPEP3Q9NQH7 507 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SNX15Q9NRS6 342 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 C1orf112Q9NSG2 853 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 TUBA8Q9NY65 449 aaPredicted RBP4.12□□□□□ -1.75
CDC27-213ENST00000571643 ZIM2Q9NZV7 527 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ZNF69Q9UC07 566 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 AMFRQ9UKV5 643 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SNX14Q9Y5W7 946 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ADAMTS7Q9UKP4 1686 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 QSER1Q2KHR3 1735 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 SCN11AQ9UI33 1791 aa4.12□□□□□ -1.75
CDC27-213ENST00000571643 ITGB4P16144 1822 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 CYP2D7A0A087X1C5 515 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 TMEM232C9JQI7 657 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 TBX3O15119 743 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 TSPAN6O43657 245 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 EXOC3O60645 756 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 CTNND1O60716 968 aaKnown RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 MOSPD3O75425 235 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 RNF8O76064 485 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 KITP10721 976 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 ADORA2AP29274 412 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 MPGP29372 298 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 CASP2P42575 452 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 RENBPP51606 427 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 CACNB3P54284 484 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 E2F1Q01094 437 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 MAPK7Q13164 816 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 LAMB3Q13751 1172 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 KLF9Q13886 244 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 NFE2Q16621 373 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 TMEM95Q3KNT9 176 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 MINDY4Q4G0A6 757 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 CEP78Q5JTW2 689 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 SYCP2LQ5T4T6 812 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 ZNF530Q6P9A1 599 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 CASC1Q6TDU7 716 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 NPNTQ6UXI9 565 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 ZNF280BQ86YH2 543 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 TPH2Q8IWU9 490 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 NGEFQ8N5V2 710 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 TEX19Q8NA77 164 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 PPP1R35Q8TAP8 253 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 SECISBP2LQ93073 1101 aaKnown RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 ZNF668Q96K58 619 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 C5orf34Q96MH7 638 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 LENG8Q96PV6 779 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 TMEM79Q9BSE2 394 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 TEX13AQ9BXU3 409 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 B3GNT5Q9BYG0 378 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 PRKRIP1Q9H875 184 aaPredicted RBP4.11□□□□□ -1.75
CDC27-213ENST00000571643 BABAM1Q9NWV8 329 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 TMOD3Q9NYL9 352 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 MAFFQ9ULX9 164 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 LZTS1Q9Y250 596 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 DOT1LQ8TEK3 1739 aa4.11□□□□□ -1.75
CDC27-213ENST00000571643 LRP5O75197 1615 aa4.1□□□□□ -1.75
CDC27-213ENST00000571643 CICQ96RK0 1608 aaPredicted RBP4.1□□□□□ -1.75
CDC27-213ENST00000571643 NUP188Q5SRE5 1749 aa4.1□□□□□ -1.75
CDC27-213ENST00000571643 LOC102723971A0A1B0GUV8 181 aa4.1□□□□□ -1.75
CDC27-213ENST00000571643 BICDL2A1A5D9 508 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms