RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PRKAG2Q9UGJ0 569 aa20.11■□□□□ 0.81
RPAIN-210ENST00000571613 A0A1W2PQH9 124 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 RNF40O75150 1001 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 ITGB8P26012 769 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 RPL22P35268 128 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 GDF10P55107 478 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 IFFO1Q0D2I5 559 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 PPIGQ13427 754 aaKnown RBP eCLIP20.1■□□□□ 0.812e-8■■■□□ 15.8
RPAIN-210ENST00000571613 DPYSQ14117 519 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 PDK1Q15118 436 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 KCTD19Q17RG1 926 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 RNASEH2BQ5TBB1 312 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 TPGS2Q68CL5 300 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 CCDC25Q86WR0 208 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 GLIS1Q8NBF1 620 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 FBXO32Q969P5 355 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 BRD8Q9H0E9 1235 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 USP29Q9HBJ7 922 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 AFF4Q9UHB7 1163 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 H0YGN5 161 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 PPP1R12AO14974 1030 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 KCNN4O15554 427 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 MYZAPP0CAP1 466 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 HSPA1AP0DMV8 641 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 HSPA1BP0DMV9 641 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 ETS1P14921 441 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 SERPINB6P35237 376 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 DEFB103AP81534 67 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 DSG1Q02413 1049 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 DUSP4Q13115 394 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 CEP85LQ5SZL2 805 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 ACBD5Q5T8D3 534 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 PRSS55Q6UWB4 352 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 RSPO2Q6UXX9 243 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 TFB1MQ8WVM0 346 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 QKIQ96PU8 341 aaKnown RBP eCLIP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 CDK5RAP1Q96SZ6 601 aaKnown RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 FRMD8Q9BZ67 464 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 DTLQ9NZJ0 730 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 OR12D3Q9UGF7 316 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 FARP1Q9Y4F1 1045 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-210ENST00000571613 NFS1Q9Y697 457 aa20.1■□□□□ 0.81
RPAIN-210ENST00000571613 RIPK2O43353 540 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 STK10O94804 968 aaKnown RBP20.09■□□□□ 0.81
RPAIN-210ENST00000571613 GLUD2P49448 558 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 GBE1Q04446 702 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 HEATR6Q6AI08 1181 aaKnown RBP20.09■□□□□ 0.81
RPAIN-210ENST00000571613 PPP1R21Q6ZMI0 780 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 DDX53Q86TM3 631 aaKnown RBP20.09■□□□□ 0.81
RPAIN-210ENST00000571613 COLGALT1Q8NBJ5 622 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 OLFM3Q96PB7 478 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 YME1L1Q96TA2 773 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 NMUR1Q9HB89 426 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 MAFFQ9ULX9 164 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 TLR6Q9Y2C9 796 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 SLC27A5Q9Y2P5 690 aa20.09■□□□□ 0.81
RPAIN-210ENST00000571613 DCLK1O15075 740 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 EIF3HO15372 352 aaKnown RBP eCLIP20.08■□□□□ 0.81
RPAIN-210ENST00000571613 RBL1P28749 1068 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 OR1D2P34982 312 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 GPR15P49685 360 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 CREMQ03060 361 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 CENPUQ71F23 418 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 PRUNE1Q86TP1 453 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 TTC25Q96NG3 672 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 TTLL2Q9BWV7 592 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 MAGEB5Q9BZ81 275 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 CDC42EP4Q9H3Q1 356 aaKnown RBP20.08■□□□□ 0.81
RPAIN-210ENST00000571613 SEMA4AQ9H3S1 761 aa20.08■□□□□ 0.81
RPAIN-210ENST00000571613 CEP350Q5VT06 3117 aa20.08■□□□□ 0.8
RPAIN-210ENST00000571613 WDR27A2RRH5 827 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 C5orf60A6NFR6 353 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 POLR3GO15318 223 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 CHADO15335 359 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 GCATO75600 419 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 TTC4O95801 387 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 URODP06132 367 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 ERCC2P18074 760 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 MX2P20592 715 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 KPNA1P52294 538 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 NRG1Q02297 640 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 SDHAF4Q5VUM1 108 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 TADA2BQ86TJ2 420 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 ZNF276Q8N554 614 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 NAT8LQ8N9F0 302 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 PDZD8Q8NEN9 1154 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 ZNF461Q8TAF7 563 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 OVCA2Q8WZ82 227 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 CASP10Q92851 521 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 RBM15Q96T37 977 aaKnown RBP eCLIP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 TMEM109Q9BVC6 243 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 ROPN1BQ9BZX4 212 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 KLC2Q9H0B6 622 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 ROPN1Q9HAT0 212 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.07■□□□□ 0.8
RPAIN-210ENST00000571613 GMIPQ9P107 970 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 VPS18Q9P253 973 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 SLC12A6Q9UHW9 1150 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 SSX2IPQ9Y2D8 614 aa20.07■□□□□ 0.8
RPAIN-210ENST00000571613 PCDHB12Q9Y5F1 795 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms