RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 MAGEA4P43358 317 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 ATP5OP48047 213 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 CACNA2D1P54289 1103 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 ERVK-21P61565 698 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 XRCC4Q13426 336 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 KYNUQ16719 465 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 USP41Q3LFD5 358 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 UBAP2Q5T6F2 1119 aaKnown RBP17.95■□□□□ 0.46
RPAIN-208ENST00000571043 GPRIN1Q7Z2K8 1008 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 FAM131BQ86XD5 332 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 OR10T2Q8NGX3 314 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-208ENST00000571043 PWWP2AQ96N64 755 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 CSPG4P5Q96PW8 444 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 TGS1Q96RS0 853 aaKnown RBP17.95■□□□□ 0.46
RPAIN-208ENST00000571043 C17orf80Q9BSJ5 609 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 C10orf88Q9H8K7 445 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 TMEM30AQ9NV96 361 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 CALCOCO1Q9P1Z2 691 aa17.95■□□□□ 0.46
RPAIN-208ENST00000571043 M0QYT0 321 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 CAPN9O14815 690 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 ALOX15BO15296 676 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 EIF3HO15372 352 aaKnown RBP eCLIP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 RGS16O15492 202 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 ACSL3O95573 720 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 LTFP02788 710 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 FYNP06241 537 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 CTNNB1P35222 781 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 ACTN2P35609 894 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 ARL4AP40617 200 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 YWHAHQ04917 246 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 DEUP1Q05D60 604 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 DNAJC21Q5F1R6 531 aaKnown RBP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 SYPL2Q5VXT5 272 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 PM20D1Q6GTS8 502 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 HFE2Q6ZVN8 426 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 CENPUQ71F23 418 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 CDKL3Q8IVW4 592 aaPredicted RBP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 NAT8LQ8N9F0 302 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 CPT1BQ92523 772 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 NTAN1Q96AB6 310 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 SERPINB12Q96P63 405 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 TTPALQ9BTX7 342 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 TRIM62Q9BVG3 475 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 USP29Q9HBJ7 922 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 LRRC4CQ9HCJ2 640 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
RPAIN-208ENST00000571043 PAK5Q9P286 719 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 USP3Q9Y6I4 520 aa17.94■□□□□ 0.46
RPAIN-208ENST00000571043 YJEFN3A6XGL0 299 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 E7ENQ6 273 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 F9P00740 461 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 USP17L7P0C7H9 530 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 BDNFP23560 247 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 IRAK1P51617 712 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 MAGOHP61326 146 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 PPP2R2AP63151 447 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 TNFAIP8L3Q5GJ75 292 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 VARS2Q5ST30 1063 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 C4orf22Q6V702 233 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 LEKR1Q6ZMV7 388 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 C4orf50Q6ZRC1 276 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 BEND5Q7L4P6 421 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 BHLHA9Q7RTU4 235 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 SPRED2Q7Z698 418 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 LRRTM3Q86VH5 581 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 ZC3H18Q86VM9 953 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 CEP57Q86XR8 500 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 CCDC77Q9BR77 488 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 NKX2-4Q9H2Z4 354 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 SAYSD1Q9NPB0 183 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 TMLHEQ9NVH6 421 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 CWC15Q9P013 229 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 NAALADL1Q9UQQ1 740 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 LZTS1Q9Y250 596 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 TRANK1O15050 2925 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 TLDC2A0PJX2 215 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 H3BRJ5 948 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 IVLP07476 585 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 ATP1A2P50993 1020 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 ARL4CP56559 192 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 GNGT1P63211 74 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 PITX1P78337 314 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 SCAPQ12770 1279 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 STAT4Q14765 748 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 LRIT3Q3SXY7 679 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 EFHC2Q5JST6 749 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 RTP2Q5QGT7 225 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 BZW1Q7L1Q6 419 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 GPR65Q8IYL9 337 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 B3GALT6Q96L58 329 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 HERC2P3Q9BVR0 1158 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 CNOT10Q9H9A5 744 aaKnown RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 SLC28A3Q9HAS3 691 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 COLQQ9Y215 455 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-208ENST00000571043 HEY1Q9Y5J3 304 aa17.93■□□□□ 0.46
RPAIN-208ENST00000571043 TBC1D4O60343 1298 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms