RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KREMEN1Q96MU8 473 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 ACOX2Q99424 681 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 GABRG3Q99928 467 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 ZSWIM1Q9BR11 485 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 EDEM2Q9BV94 578 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 CACNA2D2Q9NY47 1150 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 HCN2Q9UL51 889 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 SLC27A6Q9Y2P4 619 aa12.91□□□□□ -0.34
CTDNEP1-205ENST00000570828 A0A1W2PQF6 199 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 GFRA2O00451 464 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 PIK3R2O00459 728 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 MSI1O43347 362 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 FBXO21O94952 628 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 CALCAP01258 141 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 ZNF445P59923 1031 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 STARD3Q14849 445 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 E2F5Q15329 346 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 MAP7D1Q3KQU3 841 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 FAM217AQ8IXS0 508 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 UCMAQ8WVF2 138 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 P2RY11Q96G91 374 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
CTDNEP1-205ENST00000570828 LAMA1P25391 3075 aa12.9□□□□□ -0.35
CTDNEP1-205ENST00000570828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 NPC1O15118 1278 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 SART1O43290 800 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 MED7O43513 233 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 ZNF217O75362 1048 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 LATS1O95835 1130 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 LTFP02788 710 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 NDUFV2P19404 249 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 MPPE1Q53F39 396 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 PPM1JQ5JR12 505 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 SPDYCQ5MJ68 293 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 LYSMD4Q5XG99 296 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 ZNF787Q6DD87 383 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 KIAA1211LQ6NV74 962 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 TRIM65Q6PJ69 517 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 SLC36A4Q6YBV0 504 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 ARMCX6Q7L4S7 300 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 ENOSF1Q7L5Y1 443 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 TMEFF1Q8IYR6 380 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 PIGKQ92643 395 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 ERLEC1Q96DZ1 483 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 FAM81BQ96LP2 452 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 CIPCQ9C0C6 399 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 MIS12Q9H081 205 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 ST7Q9NRC1 585 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 MBD1Q9UIS9 605 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 RAD54BQ9Y620 910 aa12.89□□□□□ -0.35
CTDNEP1-205ENST00000570828 SPAG17Q6Q759 2223 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 LNP1A1A4G5 178 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 AP5Z1O43299 807 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 TSPAN3O60637 253 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 HOXD9P28356 352 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 DPP6P42658 865 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 PTGER3P43115 390 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 SLC11A2P49281 568 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 RPL6Q02878 288 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 ARID5AQ03989 594 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 MEA1Q16626 185 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 ADGRF1Q5T601 910 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 KIAA1324Q6UXG2 1013 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 UNC45BQ8IWX7 931 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 CLEC4CQ8WTT0 213 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 CD248Q9HCU0 757 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 STOML2Q9UJZ1 356 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 STON1Q9Y6Q2 735 aa12.88□□□□□ -0.35
CTDNEP1-205ENST00000570828 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 WASH3PC4AMC7 463 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 THAP12O43422 761 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 NCAM1P13591 858 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 GNA15P30679 374 aa12.87□□□□□ -0.35
CTDNEP1-205ENST00000570828 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms