RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	P3H2	Q8IVL5	708 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	RAVER1	Q8IY67	606 aa	Known RBP	3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	FAM156A	Q8NDB6	213 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	GJA10	Q969M2	543 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	MSI2	Q96DH6	328 aa	Known RBP	3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	ZNF845	Q96IR2	970 aa	Predicted RBP	3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	SLC25A32	Q9H2D1	315 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	SAP30L	Q9HAJ7	183 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	FZD3	Q9NPG1	666 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	MSRB1	Q9NZV6	116 aa		3.96	□□□□□ -1.78
UBR1-209	ENST00000569243	KIR2DS5	A0A0G2JLQ3	304 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	GOLGA6C	A6NDK9	693 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	GOLGA6B	A6NDN3	693 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	CLCA1	A8K7I4	914 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	KIR2DS3	K7RE56	304 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	TPP1	O14773	563 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	THAP12	O43422	761 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	TSPAN6	O43657	245 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	ATG13	O75143	517 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	ZC3H11A	O75152	810 aa	Known RBP eCLIP	3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	SLC3A2	P08195	630 aa	Known RBP	3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	GOLGA6D	P0CG33	693 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	PEX2	P28328	305 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	CDC25A	P30304	524 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	IDUA	P35475	653 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	ZNF84	P51523	738 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	RAE1	P78406	368 aa	Known RBP	3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	GBX1	Q14549	363 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	DLGAP5	Q15398	846 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	KIAA0753	Q2KHM9	967 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	FAM90A2P	Q658T7	463 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	USP17L6P	Q6QN14	398 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	CCDC149	Q6ZUS6	474 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	B4GALNT4	Q76KP1	1039 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	TRAPPC11	Q7Z392	1133 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	ANKRD13A	Q8IZ07	590 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	JDP2	Q8WYK2	163 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	KAT2B	Q92831	832 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	PRR11	Q96HE9	360 aa	Predicted RBP	3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	ZPBP	Q9BS86	351 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	TTLL2	Q9BWV7	592 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	NUP62CL	Q9H1M0	184 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	MRPL44	Q9H9J2	332 aa	Known RBP	3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	HEYL	Q9NQ87	328 aa	Predicted RBP	3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	GOLGA6A	Q9NYA3	693 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	TMOD4	Q9NZQ9	345 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	TCEAL9	Q9UHQ7	104 aa		3.95	□□□□□ -1.78
UBR1-209	ENST00000569243	LOC105371045	A0A1W2PR82	267 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	C4orf47	A7E2U8	309 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	LACTBL1	A8MY62	500 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	NTN3	O00634	580 aa	Predicted RBP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	PRY	O14603	147 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	KCNQ3	O43525	872 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	SLC28A2	O43868	658 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	NDUFB8	O95169	186 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	ENO1	P06733	434 aa	Known RBP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	SOX2	P48431	317 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	ZXDB	P98169	803 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	MTA1	Q13330	715 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	INPP5J	Q15735	1006 aa	Predicted RBP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	PRTG	Q2VWP7	1150 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	CLASRP	Q8N2M8	674 aa	Known RBP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	OR52L2P	Q8NGH6	319 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	AKAP1	Q92667	903 aa	Known RBP eCLIP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	PMM1	Q92871	262 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	CELF1	Q92879	486 aa	Known RBP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	SCNM1	Q9BWG6	230 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.94	□□□□□ -1.78
UBR1-209	ENST00000569243	EMSY	Q7Z589	1322 aa		3.94	□□□□□ -1.78
UBR1-209	ENST00000569243		A0A0G2JK05	382 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	IFITM10	A6NMD0	228 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	CCNT2	O60583	730 aa	Known RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	NDUFS1	P28331	727 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	SEMA5A	Q13591	1074 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	PIK3CD-AS1	Q5SR53	167 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	ABLIM2	Q6H8Q1	611 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	ISM2	Q6H9L7	571 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	GLMP	Q8WWB7	406 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	ASB12	Q8WXK4	309 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	PHKB	Q93100	1093 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	FAM84B	Q96KN1	310 aa	Predicted RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	WDR83	Q9BRX9	315 aa	Known RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	NTPCR	Q9BSD7	190 aa	Known RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	MOV10	Q9HCE1	1003 aa	Known RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	THSD1	Q9NS62	852 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	ASNSD1	Q9NWL6	643 aa		3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	IPO11	Q9UI26	975 aa	Known RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	NOB1	Q9ULX3	412 aa	Known RBP	3.93	□□□□□ -1.78
UBR1-209	ENST00000569243	TMEM272	A0A1B0GTI8	110 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	COQ9	O75208	318 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	HOXB2	P14652	356 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	IGHMBP2	P38935	993 aa	Known RBP	3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	PBX1	P40424	430 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	GFOD2	Q3B7J2	385 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	MRNIP	Q6NTE8	343 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	LAS2	Q8IYD9	372 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	MYO1H	Q8N1T3	1032 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	IQCF1	Q8N6M8	205 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	FAM47B	Q8NA70	645 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	ZFPM2	Q8WW38	1151 aa		3.92	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms