RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PIK3R2O00459 728 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 CAPN9O14815 690 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 KAT7O95251 611 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 LATS1O95835 1130 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 CYBBP04839 570 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 HMBSP08397 361 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 HOXA6P31267 233 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 CLCN1P35523 988 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 TNFRSF4P43489 277 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 MRPS21P82921 87 aaKnown RBP13.99□□□□□ -0.17
CLK3-218ENST00000566926 SATB1Q01826 763 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 PDCLQ13371 301 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 TRIP4Q15650 581 aaPredicted RBP13.99□□□□□ -0.17
CLK3-218ENST00000566926 TRIM72Q6ZMU5 477 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 TPGS1Q6ZTW0 290 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 UNC45BQ8IWX7 931 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 SCUBE3Q8IX30 993 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 ZBTB44Q8NCP5 570 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 NELL1Q92832 810 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 FAM149B1Q96BN6 582 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 PPP1R13BQ96KQ4 1090 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 PHOX2BQ99453 314 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLK3-218ENST00000566926 ACP6Q9NPH0 428 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 ARHGEF4Q9NR80 690 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 INTUQ9ULD6 942 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 SLC8A2Q9UPR5 921 aa13.99□□□□□ -0.17
CLK3-218ENST00000566926 PTPRZ1P23471 2315 aaPredicted RBP13.99□□□□□ -0.17
CLK3-218ENST00000566926 E5RJQ4 531 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 NEDD8-MDP1E9PL57 170 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 KRT86O43790 486 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 TULP3O75386 442 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 GABBR2O75899 941 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 PLEKP08567 350 aaPredicted RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 GZMAP12544 262 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 NCAM1P13591 858 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 TYRP14679 529 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 CYP11B1P15538 503 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 VAV2P52735 878 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 CDR2Q01850 454 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 KIF5AQ12840 1032 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 HSF5Q4G112 596 aaPredicted RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 EFHC1Q5JVL4 640 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 TSSK4Q6SA08 328 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 SYT13Q7L8C5 426 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 ZNF571Q7Z3V5 609 aaPredicted RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 SLC47A2Q86VL8 602 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 DENND1CQ8IV53 801 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 ETFBKMTQ8IXQ9 262 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 CPXM2Q8N436 756 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 CAMKK1Q8N5S9 505 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 TMEM35BQ8NCS4 154 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 RPLP0P6Q8NHW5 317 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 EPS8L1Q8TE68 723 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 IPO4Q8TEX9 1081 aaKnown RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 SERPINB11Q96P15 392 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 AGPAT1Q99943 283 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 POPDC2Q9HBU9 364 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 MYO1AQ9UBC5 1043 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 ADAMTS1Q9UHI8 967 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 AGO1Q9UL18 857 aaKnown RBP13.98□□□□□ -0.17
CLK3-218ENST00000566926 R4GN57 208 aa13.98□□□□□ -0.17
CLK3-218ENST00000566926 CCDC163A0A0D9SF12 145 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 TBC1D3BA6NDS4 549 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 K7EQS6 105 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 CACNG3O60359 315 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
CLK3-218ENST00000566926 KLKB1P03952 638 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 GLI1P08151 1106 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 TDGF1P13385 188 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 TNFAIP3P21580 790 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 CNR2P34972 360 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 SLC6A11P48066 632 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 YWHAZP63104 245 aaKnown RBP13.97□□□□□ -0.17
CLK3-218ENST00000566926 RING1Q06587 406 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 NNTQ13423 1086 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 E2F5Q15329 346 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 NUGGCQ68CJ6 796 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 GRAMD4Q6IC98 578 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 C12orf40Q86WS4 652 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 ZDHHC17Q8IUH5 632 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 PASD1Q8IV76 773 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 MSANTD4Q8NCY6 345 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 CLEC4CQ8WTT0 213 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 IRX2Q9BZI1 471 aaPredicted RBP13.97□□□□□ -0.17
CLK3-218ENST00000566926 SYNCQ9H7C4 482 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 DNAJC17Q9NVM6 304 aaKnown RBP13.97□□□□□ -0.17
CLK3-218ENST00000566926 ASNSD1Q9NWL6 643 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 CYTH4Q9UIA0 394 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 NOCTQ9UK39 431 aaKnown RBP13.97□□□□□ -0.17
CLK3-218ENST00000566926 PCDHA13Q9Y5I0 950 aa13.97□□□□□ -0.17
CLK3-218ENST00000566926 EML5Q05BV3 1969 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms