RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 MSI1O43347 362 aaKnown RBP21.03■□□□□ 0.96
CLN6-207ENST00000566347 GABBR2O75899 941 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 LTFP02788 710 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 HOXD9P28356 352 aaPredicted RBP21.03■□□□□ 0.96
CLN6-207ENST00000566347 IL12RB1P42701 662 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 NUGGCQ68CJ6 796 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 SLC23A3Q6PIS1 610 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 ENOSF1Q7L5Y1 443 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 UNC45BQ8IWX7 931 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 ERLEC1Q96DZ1 483 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 FAM81BQ96LP2 452 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 IRX2Q9BZI1 471 aaPredicted RBP21.03■□□□□ 0.96
CLN6-207ENST00000566347 CIPCQ9C0C6 399 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 TMEM74BQ9NUR3 256 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 RWDD2AQ9UIY3 292 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 CLEC4EQ9ULY5 219 aa21.03■□□□□ 0.96
CLN6-207ENST00000566347 PIK3R2O00459 728 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 SART1O43290 800 aaKnown RBP21.02■□□□□ 0.96
CLN6-207ENST00000566347 SYNCRIPO60506 623 aaKnown RBP21.02■□□□□ 0.96
CLN6-207ENST00000566347 KCNK5O95279 499 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 KRT5P13647 590 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 ITPKAP23677 461 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 ARID5AQ03989 594 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 RING1Q06587 406 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 ZNF33AQ06730 810 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 MEA1Q16626 185 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 FUT11Q495W5 492 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 KIAA1324Q6UXG2 1013 aaKnown RBP21.02■□□□□ 0.96
CLN6-207ENST00000566347 METTL3Q86U44 580 aaKnown RBP21.02■□□□□ 0.96
CLN6-207ENST00000566347 TMA16Q96EY4 203 aaKnown RBP21.02■□□□□ 0.96
CLN6-207ENST00000566347 PRDM16Q9HAZ2 1276 aa21.02■□□□□ 0.96
CLN6-207ENST00000566347 UBE2TQ9NPD8 197 aaPredicted RBP21.02■□□□□ 0.96
CLN6-207ENST00000566347 CDX4O14627 284 aaPredicted RBP21.01■□□□□ 0.95
CLN6-207ENST00000566347 MED7O43513 233 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 TSPAN3O60637 253 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 NDUFS2O75306 463 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 CALCAP01258 141 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 IGLV3-27P01718 113 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 ACADSBP45954 432 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 SLC11A2P49281 568 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 ZNF234Q14588 700 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 DUOXA1Q1HG43 343 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 N4BP2L1Q5TBK1 243 aaPredicted RBP21.01■□□□□ 0.95
CLN6-207ENST00000566347 WFIKKN2Q8TEU8 576 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 CNTNAP3BQ96NU0 1288 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 TRIM62Q9BVG3 475 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 CNTNAP3Q9BZ76 1288 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 SLC6A17Q9H1V8 727 aa21.01■□□□□ 0.95
CLN6-207ENST00000566347 ATXN2Q99700 1313 aaKnown RBP21.01■□□□□ 0.95
CLN6-207ENST00000566347 IRAK2O43187 625 aa21■□□□□ 0.95
CLN6-207ENST00000566347 CFIP05156 583 aa21■□□□□ 0.95
CLN6-207ENST00000566347 GPD2P43304 727 aa21■□□□□ 0.95
CLN6-207ENST00000566347 RPL34P49207 117 aaKnown RBP21■□□□□ 0.95
CLN6-207ENST00000566347 TBX4P57082 545 aa21■□□□□ 0.95
CLN6-207ENST00000566347 CAMK4Q16566 473 aa21■□□□□ 0.95
CLN6-207ENST00000566347 MPP7Q5T2T1 576 aa21■□□□□ 0.95
CLN6-207ENST00000566347 DEFB119Q8N690 84 aa21■□□□□ 0.95
CLN6-207ENST00000566347 ZNF557Q8N988 423 aaPredicted RBP21■□□□□ 0.95
CLN6-207ENST00000566347 CLEC4CQ8WTT0 213 aa21■□□□□ 0.95
CLN6-207ENST00000566347 STK32AQ8WU08 396 aa21■□□□□ 0.95
CLN6-207ENST00000566347 FOXJ1Q92949 421 aa21■□□□□ 0.95
CLN6-207ENST00000566347 AZIN2Q96A70 460 aa21■□□□□ 0.95
CLN6-207ENST00000566347 MIS12Q9H081 205 aa21■□□□□ 0.95
CLN6-207ENST00000566347 ST7Q9NRC1 585 aa21■□□□□ 0.95
CLN6-207ENST00000566347 SLC6A14Q9UN76 642 aa21■□□□□ 0.95
CLN6-207ENST00000566347 CKAP5Q14008 2032 aa21■□□□□ 0.95
CLN6-207ENST00000566347 NCAM1P13591 858 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 ENGP17813 658 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 CD6P30203 668 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 HLA-FP30511 346 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 NOVA1P51513 510 aaKnown RBP20.99■□□□□ 0.95
CLN6-207ENST00000566347 NNTQ13423 1086 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 SYCP2LQ5T4T6 812 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 TMEM215Q68D42 235 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 PSAPL1Q6NUJ1 521 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 SERPINA13PQ6UXR4 307 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 BEND5Q7L4P6 421 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 SLC41A1Q8IVJ1 513 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 AHI1Q8N157 1196 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.99■□□□□ 0.95
CLN6-207ENST00000566347 ZNF419Q96HQ0 510 aaPredicted RBP20.99■□□□□ 0.95
CLN6-207ENST00000566347 HSPA12BQ96MM6 686 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 SERPINB11Q96P15 392 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 DDX50Q9BQ39 737 aaKnown RBP20.99■□□□□ 0.95
CLN6-207ENST00000566347 MKRN2Q9H000 416 aaKnown RBP20.99■□□□□ 0.95
CLN6-207ENST00000566347 CHMP5Q9NZZ3 219 aa20.99■□□□□ 0.95
CLN6-207ENST00000566347 USP36Q9P275 1121 aaKnown RBP20.99■□□□□ 0.95
CLN6-207ENST00000566347 ACSL4O60488 711 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 EPHX1P07099 455 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 SERPINF2P08697 491 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 CSRP1P21291 193 aaKnown RBP20.98■□□□□ 0.95
CLN6-207ENST00000566347 PRKCHP24723 683 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 PMLP29590 882 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 OXTRP30559 389 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 ATXN3P54252 364 aaPredicted RBP20.98■□□□□ 0.95
CLN6-207ENST00000566347 GFPT1Q06210 699 aaPredicted RBP20.98■□□□□ 0.95
CLN6-207ENST00000566347 UAP1L1Q3KQV9 507 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 PIK3R6Q5UE93 754 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 TRIM65Q6PJ69 517 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 TMPRSS6Q8IU80 811 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms