RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SLC23A3Q6PIS1 610 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 CLEC4CQ8WTT0 213 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 SRRTQ9BXP5 876 aaKnown RBP19.12■□□□□ 0.65
USB1-213ENST00000566292 NUSAP1Q9BXS6 441 aaKnown RBP19.12■□□□□ 0.65
USB1-213ENST00000566292 SLC2A11Q9BYW1 496 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 ELOVL2Q9NXB9 296 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 STOML2Q9UJZ1 356 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 CACNA1BQ00975 2339 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 GIPC1O14908 333 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 NPC1O15118 1278 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 GNA14O95837 355 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 AFPP02771 609 aaKnown RBP19.11■□□□□ 0.65
USB1-213ENST00000566292 DPP6P42658 865 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 ZNF33AQ06730 810 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 LMAN2Q12907 356 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 ZNF234Q14588 700 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 STILQ15468 1287 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 MPPE1Q53F39 396 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 KIAA1324Q6UXG2 1013 aaKnown RBP19.11■□□□□ 0.65
USB1-213ENST00000566292 UCMAQ8WVF2 138 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 SORCS1Q8WY21 1168 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 IRGQQ8WZA9 623 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 MKRN2Q9H000 416 aaKnown RBP19.11■□□□□ 0.65
USB1-213ENST00000566292 FSCN3Q9NQT6 498 aa19.11■□□□□ 0.65
USB1-213ENST00000566292 CACNA1EQ15878 2313 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 LATS1O95835 1130 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 IGLV3-27P01718 113 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 LTFP02788 710 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 ENGP17813 658 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 HOXD12P35452 270 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 NOVA1P51513 510 aaKnown RBP19.1■□□□□ 0.65
USB1-213ENST00000566292 SGSHP51688 502 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 STARD3Q14849 445 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 EIF4HQ15056 248 aaKnown RBP19.1■□□□□ 0.65
USB1-213ENST00000566292 ADGRF1Q5T601 910 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 HSFY1Q96LI6 401 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 INTS2Q9H0H0 1204 aaKnown RBP19.1■□□□□ 0.65
USB1-213ENST00000566292 CNTN6Q9UQ52 1028 aa19.1■□□□□ 0.65
USB1-213ENST00000566292 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.1■□□□□ 0.65
USB1-213ENST00000566292 CFIP05156 583 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 PRKCHP24723 683 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 HLA-FP30511 346 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 MAPK8P45983 427 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 DUOXA1Q1HG43 343 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 UAP1L1Q3KQV9 507 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 SH3PXD2AQ5TCZ1 1133 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 METTL3Q86U44 580 aaKnown RBP19.09■□□□□ 0.65
USB1-213ENST00000566292 TRIML1Q8N9V2 468 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 TMA16Q96EY4 203 aaKnown RBP19.09■□□□□ 0.65
USB1-213ENST00000566292 ZNF419Q96HQ0 510 aaPredicted RBP19.09■□□□□ 0.65
USB1-213ENST00000566292 HSPA12BQ96MM6 686 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 CIPCQ9C0C6 399 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 PRDM16Q9HAZ2 1276 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 CEP295Q9C0D2 2601 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 PCNX2A6NKB5 2137 aa19.09■□□□□ 0.65
USB1-213ENST00000566292 KCNJ18B7U540 433 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 FBXO21O94952 628 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 FYNP06241 537 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 SERPINF2P08697 491 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 NCAM1P13591 858 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 GPD2P43304 727 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 RPL34P49207 117 aaKnown RBP19.08■□□□□ 0.64
USB1-213ENST00000566292 COPAP53621 1224 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 ZNF445P59923 1031 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 CEP76Q8TAP6 659 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 MED15Q96RN5 788 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 MIS12Q9H081 205 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 CAPN10Q9HC96 672 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 UBE2TQ9NPD8 197 aaPredicted RBP19.08■□□□□ 0.64
USB1-213ENST00000566292 USP36Q9P275 1121 aaKnown RBP19.08■□□□□ 0.64
USB1-213ENST00000566292 ANGPTL2Q9UKU9 493 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 SLC6A14Q9UN76 642 aa19.08■□□□□ 0.64
USB1-213ENST00000566292 NUMA1Q14980 2115 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 GOLGA6L7A0A1B0GV03 622 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 TIMM44O43615 452 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 KRT5P13647 590 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 CSRP1P21291 193 aaKnown RBP19.07■□□□□ 0.64
USB1-213ENST00000566292 SLC6A4P31645 630 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 SHC2P98077 582 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 CAMK4Q16566 473 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 FAM133BQ5BKY9 247 aaKnown RBP19.07■□□□□ 0.64
USB1-213ENST00000566292 RFWD3Q6PCD5 774 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 KIAA0907Q7Z7F0 614 aaPredicted RBP19.07■□□□□ 0.64
USB1-213ENST00000566292 TMPRSS6Q8IU80 811 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 SCUBE3Q8IX30 993 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.07■□□□□ 0.64
USB1-213ENST00000566292 WFDC5Q8TCV5 224 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 TOE1Q96GM8 510 aaKnown RBP19.07■□□□□ 0.64
USB1-213ENST00000566292 ITM2CQ9NQX7 267 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 ABCB8Q9NUT2 735 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 WSB2Q9NYS7 404 aaPredicted RBP19.07■□□□□ 0.64
USB1-213ENST00000566292 KIAA1468Q9P260 1216 aa19.07■□□□□ 0.64
USB1-213ENST00000566292 USP24Q9UPU5 2620 aa19.06■□□□□ 0.64
USB1-213ENST00000566292 ACSL4O60488 711 aa19.06■□□□□ 0.64
USB1-213ENST00000566292 SYNCRIPO60506 623 aaKnown RBP19.06■□□□□ 0.64
USB1-213ENST00000566292 NDUFS2O75306 463 aa19.06■□□□□ 0.64
USB1-213ENST00000566292 HLA-EP13747 358 aa19.06■□□□□ 0.64
USB1-213ENST00000566292 CD6P30203 668 aa19.06■□□□□ 0.64
USB1-213ENST00000566292 TBX4P57082 545 aa19.06■□□□□ 0.64
USB1-213ENST00000566292 RING1Q06587 406 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms