RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 SPARCL1Q14515 664 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 TRIM71Q2Q1W2 868 aaKnown RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 ZACNQ401N2 412 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 TMEM196Q5HYL7 178 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 C10orf62Q5T681 223 aaPredicted RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 GRHL2Q6ISB3 625 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 BCDIN3DQ7Z5W3 292 aaKnown RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 TTC30AQ86WT1 665 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 GATAD2AQ86YP4 633 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 P3H2Q8IVL5 708 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 PRSS3P2Q8NHM4 247 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 PRPF18Q99633 342 aaKnown RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 GAR1Q9NY12 217 aaKnown RBP4.02□□□□□ -1.77
PALB2-204ENST00000566069 TFCP2L1Q9NZI6 479 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 LPAR3Q9UBY5 353 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 ASAP1Q9ULH1 1129 aa4.02□□□□□ -1.77
PALB2-204ENST00000566069 TTBK1Q5TCY1 1321 aaPredicted RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 GXYLT2A0PJZ3 443 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 LGALS16A8MUM7 142 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 J3KTA2 159 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 ASNA1O43681 348 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 EXOC3O60645 756 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 ALPLP05186 524 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 APEHP13798 732 aaKnown RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 GSTM5P46439 218 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 ALDH18A1P54886 795 aaKnown RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 DNASE1L3Q13609 305 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 CSHL1Q14406 222 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 TWIST1Q15672 202 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 PFKFB4Q16877 469 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 LEXMQ3ZCV2 418 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 C4orf46Q504U0 113 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 FAM90A2PQ658T7 463 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 MIS18BP1Q6P0N0 1132 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 MRPL10Q7Z7H8 261 aaKnown RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 C16orf52Q8NHV5 167 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 OVCA2Q8WZ82 227 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 EDC3Q96F86 508 aaKnown RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 RMDN3Q96TC7 470 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 ARPC5LQ9BPX5 153 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 CINPQ9BW66 212 aaPredicted RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 TP63Q9H3D4 680 aaPredicted RBP4.01□□□□□ -1.77
PALB2-204ENST00000566069 ASIC5Q9NY37 505 aa4.01□□□□□ -1.77
PALB2-204ENST00000566069 PNMA6EA0A0J9YXQ4 647 aa4□□□□□ -1.77
PALB2-204ENST00000566069 BTBD19C9JJ37 291 aa4□□□□□ -1.77
PALB2-204ENST00000566069 POC1B-GALNT4F8VUJ3 575 aa4□□□□□ -1.77
PALB2-204ENST00000566069 CA12O43570 354 aa4□□□□□ -1.77
PALB2-204ENST00000566069 MT-CO3P00414 261 aa4□□□□□ -1.77
PALB2-204ENST00000566069 CSTBP04080 98 aaKnown RBP4□□□□□ -1.77
PALB2-204ENST00000566069 ANXA6P08133 673 aa4□□□□□ -1.77
PALB2-204ENST00000566069 TMIGD3P0DMS9 266 aaPredicted RBP4□□□□□ -1.77
PALB2-204ENST00000566069 PRF1P14222 555 aa4□□□□□ -1.77
PALB2-204ENST00000566069 MMP8P22894 467 aa4□□□□□ -1.77
PALB2-204ENST00000566069 GPC5P78333 572 aa4□□□□□ -1.77
PALB2-204ENST00000566069 CFHR3Q02985 330 aa4□□□□□ -1.77
PALB2-204ENST00000566069 CCDC15Q0P6D6 951 aa4□□□□□ -1.77
PALB2-204ENST00000566069 GALNT1Q10472 559 aaPredicted RBP4□□□□□ -1.77
PALB2-204ENST00000566069 SEMA3BQ13214 749 aa4□□□□□ -1.77
PALB2-204ENST00000566069 TRIM14Q14142 442 aa4□□□□□ -1.77
PALB2-204ENST00000566069 FAM83BQ5T0W9 1011 aa4□□□□□ -1.77
PALB2-204ENST00000566069 CCDC144NLQ6NUI1 221 aa4□□□□□ -1.77
PALB2-204ENST00000566069 PIK3AP1Q6ZUJ8 805 aa4□□□□□ -1.77
PALB2-204ENST00000566069 NRSN1Q8IZ57 195 aa4□□□□□ -1.77
PALB2-204ENST00000566069 GALNT4Q8N4A0 578 aa4□□□□□ -1.77
PALB2-204ENST00000566069 C12orf76Q8N812 135 aaPredicted RBP4□□□□□ -1.77
PALB2-204ENST00000566069 MAFAQ8NHW3 353 aaPredicted RBP4□□□□□ -1.77
PALB2-204ENST00000566069 PIGOQ8TEQ8 1089 aa4□□□□□ -1.77
PALB2-204ENST00000566069 EID2BQ96D98 161 aa4□□□□□ -1.77
PALB2-204ENST00000566069 FYTTD1Q96QD9 318 aaKnown RBP4□□□□□ -1.77
PALB2-204ENST00000566069 EIF3CQ99613 913 aaKnown RBP4□□□□□ -1.77
PALB2-204ENST00000566069 PAAF1Q9BRP4 392 aa4□□□□□ -1.77
PALB2-204ENST00000566069 FSCN3Q9NQT6 498 aa4□□□□□ -1.77
PALB2-204ENST00000566069 VPS45Q9NRW7 570 aa4□□□□□ -1.77
PALB2-204ENST00000566069 TCRBV5S1A1TA0A578 114 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 UBE2Q2LH0YL09 131 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 ACKR2O00590 384 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 CTIFO43310 598 aaKnown RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 PRAMEF2O60811 474 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 TAF5LO75529 589 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 TCEA3O75764 348 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 CHRM5P08912 532 aaPredicted RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 MATN1P21941 496 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 SERPINF1P36955 418 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 TRAPPC10P48553 1259 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 COPB1P53618 953 aaKnown RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 BFSP2Q13515 415 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 LARS2Q15031 903 aaKnown RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 ELF2Q15723 593 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 PDCD2Q16342 344 aaPredicted RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 FAM187BQ17R55 369 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 GRAMD1BQ3KR37 738 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 TUBB8Q3ZCM7 444 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 CERKLQ49MI3 558 aaPredicted RBP3.99□□□□□ -1.77
PALB2-204ENST00000566069 CCDC38Q502W7 563 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 MSANTD2Q6P1R3 559 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 GGT6Q6P531 493 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 SHC4Q6S5L8 630 aa3.99□□□□□ -1.77
PALB2-204ENST00000566069 SERPINA13PQ6UXR4 307 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms