RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 DDX47Q9H0S4 455 aaKnown RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 HBS1LQ9Y450 684 aaKnown RBP19.43■□□□□ 0.7
COMMD4-213ENST00000565834 C2orf78A6NCI8 922 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 KCNU1A8MYU2 1149 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 RFXAPO00287 272 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 CREB3O43889 395 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 PHF2O75151 1096 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 XYLBO75191 536 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 HMBSP08397 361 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 CDC25CP30307 473 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 CYP1B1Q16678 543 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 MRPS31Q92665 395 aaKnown RBP19.42■□□□□ 0.7
COMMD4-213ENST00000565834 PPP2R3CQ969Q6 453 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 MAGOHBQ96A72 148 aaKnown RBP19.42■□□□□ 0.7
COMMD4-213ENST00000565834 CSPG4P5Q96PW8 444 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 HAPLN3Q96S86 360 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 OSBPL2Q9H1P3 480 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 ZDHHC7Q9NXF8 308 aa19.42■□□□□ 0.7
COMMD4-213ENST00000565834 CWC15Q9P013 229 aaKnown RBP19.42■□□□□ 0.7
COMMD4-213ENST00000565834 UQCRHLA0A096LP55 91 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 PAGE1O75459 146 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 MOCS2O96007 188 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-213ENST00000565834 IGLV3-27P01718 113 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 UQCRHP07919 91 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 MYL4P12829 197 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 GOT1P17174 413 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 ZNF135P52742 658 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-213ENST00000565834 MLLT1Q03111 559 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-213ENST00000565834 RING1Q06587 406 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 SEMA3BQ13214 749 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 ERCC6LQ2NKX8 1250 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 CCDC70Q6NSX1 233 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 GAREM2Q75VX8 874 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 C12orf50Q8NA57 414 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-213ENST00000565834 PCDH19Q8TAB3 1148 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 C1orf54Q8WWF1 131 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 CDCA3Q99618 268 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-213ENST00000565834 EPAS1Q99814 870 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 SLITRK6Q9H5Y7 841 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 TRPC7Q9HCX4 862 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 HOMER3Q9NSC5 361 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 OR12D3Q9UGF7 316 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 SLC12A6Q9UHW9 1150 aa19.41■□□□□ 0.7
COMMD4-213ENST00000565834 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
COMMD4-213ENST00000565834 EEF2KO00418 725 aaKnown RBP19.4■□□□□ 0.7
COMMD4-213ENST00000565834 FGF19O95750 216 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 PTPN2P17706 415 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 CHRNA3P32297 505 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 NUGGCQ68CJ6 796 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 C8orf74Q6P047 294 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 ATP6V0D2Q8N8Y2 350 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 ATG4AQ8WYN0 398 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 DCLK3Q9C098 648 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 SIK2Q9H0K1 926 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 ATXN3LQ9H3M9 355 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 HCFC1R1Q9NWW0 138 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 FAM72CH0Y354 149 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 APOL1O14791 398 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 POU2F2P09086 479 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 EPHA5P54756 1037 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 TPI1P60174 286 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 COG7P83436 770 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 CYP4F8P98187 520 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 ZNF697Q5TEC3 545 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 FAM72AQ5TYM5 149 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 TXNDC8Q6A555 127 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 FAM72DQ6L9T8 149 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 RFX8Q6ZV50 586 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 FAM72BQ86X60 149 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 PQLC3Q8N755 202 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 TTC13Q8NBP0 860 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 HAUS1Q96CS2 278 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 BTN2A3PQ96KV6 586 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 RNF38Q9H0F5 515 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 LRRC19Q9H756 370 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 SNX10Q9Y5X0 201 aa19.4■□□□□ 0.7
COMMD4-213ENST00000565834 A0A1W2PRU2 124 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 APOC4-APOC2K7ER74 178 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 DAPK3O43293 454 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 APOC2P02655 101 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 RHOXF2BP0C7M4 288 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 MBL2P11226 248 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-213ENST00000565834 ZFXP17010 805 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-213ENST00000565834 HCAR3P49019 387 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 FNTAP49354 379 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 MTA1Q13330 715 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 NAA30Q147X3 362 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-213ENST00000565834 CCNG2Q16589 344 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 SLC9A4Q6AI14 798 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 PDZD4Q76G19 769 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-213ENST00000565834 UNC45BQ8IWX7 931 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 LEMD2Q8NC56 503 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 CCDC26Q8TAB7 109 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 PLD4Q96BZ4 506 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 RUNDC3BQ96NL0 473 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 RHOXF2Q9BQY4 288 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 LRRC1Q9BTT6 524 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 PRKD2Q9BZL6 878 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 ZNF576Q9H609 170 aa19.39■□□□□ 0.69
COMMD4-213ENST00000565834 PRDM16Q9HAZ2 1276 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms