RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 DAB2IPQ5VWQ8 1189 aa20.72■□□□□ 0.91
CLN6-206ENST00000565471 NUGGCQ68CJ6 796 aa20.72■□□□□ 0.91
CLN6-206ENST00000565471 ENOSF1Q7L5Y1 443 aa20.72■□□□□ 0.91
CLN6-206ENST00000565471 METTL3Q86U44 580 aaKnown RBP20.72■□□□□ 0.91
CLN6-206ENST00000565471 FAM81BQ96LP2 452 aa20.72■□□□□ 0.91
CLN6-206ENST00000565471 TMEM74BQ9NUR3 256 aa20.72■□□□□ 0.91
CLN6-206ENST00000565471 CEP192Q8TEP8 1941 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 PIK3R2O00459 728 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 SART1O43290 800 aaKnown RBP20.71■□□□□ 0.91
CLN6-206ENST00000565471 KRT5P13647 590 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 GPD2P43304 727 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 CAMK4Q16566 473 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 FUT11Q495W5 492 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 SLC23A3Q6PIS1 610 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 UNC45BQ8IWX7 931 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 CLEC4CQ8WTT0 213 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 STK32AQ8WU08 396 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 AZIN2Q96A70 460 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 TMA16Q96EY4 203 aaKnown RBP20.71■□□□□ 0.91
CLN6-206ENST00000565471 NUSAP1Q9BXS6 441 aaKnown RBP20.71■□□□□ 0.91
CLN6-206ENST00000565471 UBE2TQ9NPD8 197 aaPredicted RBP20.71■□□□□ 0.91
CLN6-206ENST00000565471 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 CYP8B1Q9UNU6 501 aa20.71■□□□□ 0.91
CLN6-206ENST00000565471 CDX4O14627 284 aaPredicted RBP20.7■□□□□ 0.9
CLN6-206ENST00000565471 MED7O43513 233 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 KCNK5O95279 499 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 ITPKAP23677 461 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 ACADSBP45954 432 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 SLC11A2P49281 568 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 ZNF33AQ06730 810 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 ZNF234Q14588 700 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 MPP7Q5T2T1 576 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 TMEM215Q68D42 235 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 SMYD5Q6GMV2 418 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 TRIM65Q6PJ69 517 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 RABEPKQ7Z6M1 372 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLN6-206ENST00000565471 CEP76Q8TAP6 659 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 WFIKKN2Q8TEU8 576 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 ERLEC1Q96DZ1 483 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 CIPCQ9C0C6 399 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 MIS12Q9H081 205 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 SLC6A17Q9H1V8 727 aa20.7■□□□□ 0.9
CLN6-206ENST00000565471 CNOT1A5YKK6 2376 aaKnown RBP20.7■□□□□ 0.9
CLN6-206ENST00000565471 IRAK2O43187 625 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 SYNCRIPO60506 623 aaKnown RBP20.69■□□□□ 0.9
CLN6-206ENST00000565471 TSPAN3O60637 253 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 FYNP06241 537 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 NCAM1P13591 858 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 KCNA4P22459 653 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 HLA-FP30511 346 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 TBX4P57082 545 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 NNTQ13423 1086 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 DUOXA1Q1HG43 343 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 KIAA1324Q6UXG2 1013 aaKnown RBP20.69■□□□□ 0.9
CLN6-206ENST00000565471 BEND5Q7L4P6 421 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 KIAA0907Q7Z7F0 614 aaPredicted RBP20.69■□□□□ 0.9
CLN6-206ENST00000565471 MLKLQ8NB16 471 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 SERPINB11Q96P15 392 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 MED15Q96RN5 788 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 TRIM62Q9BVG3 475 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 MKRN2Q9H000 416 aaKnown RBP20.69■□□□□ 0.9
CLN6-206ENST00000565471 PRDM16Q9HAZ2 1276 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 ST7Q9NRC1 585 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 USP36Q9P275 1121 aaKnown RBP20.69■□□□□ 0.9
CLN6-206ENST00000565471 CKAP5Q14008 2032 aa20.69■□□□□ 0.9
CLN6-206ENST00000565471 ATXN2Q99700 1313 aaKnown RBP20.69■□□□□ 0.9
CLN6-206ENST00000565471 GTPBP10A4D1E9 387 aaKnown RBP20.68■□□□□ 0.9
CLN6-206ENST00000565471 ACSL4O60488 711 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 NDUFS2O75306 463 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 ARID5AQ03989 594 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 N4BP2L1Q5TBK1 243 aaPredicted RBP20.68■□□□□ 0.9
CLN6-206ENST00000565471 PIK3R6Q5UE93 754 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 DENND1BQ6P3S1 775 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 SERPINA13PQ6UXR4 307 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 SLC41A1Q8IVJ1 513 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 SCUBE3Q8IX30 993 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 AHI1Q8N157 1196 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 ZNF557Q8N988 423 aaPredicted RBP20.68■□□□□ 0.9
CLN6-206ENST00000565471 DQX1Q8TE96 717 aaKnown RBP20.68■□□□□ 0.9
CLN6-206ENST00000565471 ZNF606Q8WXB4 792 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 ZNF419Q96HQ0 510 aaPredicted RBP20.68■□□□□ 0.9
CLN6-206ENST00000565471 CRACR2AQ9BSW2 395 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 SLC4A5Q9BY07 1137 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 CD93Q9NPY3 652 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 SLC6A14Q9UN76 642 aa20.68■□□□□ 0.9
CLN6-206ENST00000565471 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
CLN6-206ENST00000565471 PRKCHP24723 683 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 PMLP29590 882 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 CD6P30203 668 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 GNA15P30679 374 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 FAM133BQ5BKY9 247 aaKnown RBP20.67■□□□□ 0.9
CLN6-206ENST00000565471 GBP6Q6ZN66 633 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 TMPRSS6Q8IU80 811 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 IRF2BP1Q8IU81 584 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 DEFB119Q8N690 84 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 SORCS1Q8WY21 1168 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 FOXJ1Q92949 421 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 FAM149B1Q96BN6 582 aa20.67■□□□□ 0.9
CLN6-206ENST00000565471 FCRL2Q96LA5 508 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms