RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SAP30LQ9HAJ7 183 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 USP29Q9HBJ7 922 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 SAYSD1Q9NPB0 183 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 SAGE1Q9NXZ1 904 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 KIF17Q9P2E2 1029 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 VPS4AQ9UN37 437 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 CNTN6Q9UQ52 1028 aa5.1□□□□□ -1.59
CHD9-215ENST00000565442 B9A039 149 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 M0QZQ0 153 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 TJP3O95049 919 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 CELA2AP08217 269 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 LMAN2Q12907 356 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 EZH2Q15910 746 aaKnown RBP5.09□□□□□ -1.59
CHD9-215ENST00000565442 TSTD2Q5T7W7 516 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 KIRREL2Q6UWL6 708 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 NAPRTQ6XQN6 538 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 TRABD2AQ86V40 505 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 RASAL3Q86YV0 1011 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 ANKRD18AQ8IVF6 992 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 FTSJ3Q8IY81 847 aaKnown RBP5.09□□□□□ -1.59
CHD9-215ENST00000565442 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.09□□□□□ -1.59
CHD9-215ENST00000565442 NGDNQ8NEJ9 315 aaKnown RBP5.09□□□□□ -1.59
CHD9-215ENST00000565442 HMGB4Q8WW32 186 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 DDB2Q92466 427 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 ZBTB9Q96C00 473 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 MACROD1Q9BQ69 325 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 SNX15Q9NRS6 342 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 VPS45Q9NRW7 570 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 FBXO28Q9NVF7 368 aa5.09□□□□□ -1.59
CHD9-215ENST00000565442 H0Y3Z8 333 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 M0QYT0 321 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 EIF3FO00303 357 aaPredicted RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 FAM155BO75949 473 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 KRT38O76015 456 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 TMIGD3P0DMS9 266 aaPredicted RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 PEPDP12955 493 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 DRD4P21917 467 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 PAX3P23760 479 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 ADD2P35612 726 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 COPB1P53618 953 aaKnown RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 TXNL4AP83876 142 aaKnown RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 SF3A3Q12874 501 aaKnown RBP eCLIP5.08□□□□□ -1.6
CHD9-215ENST00000565442 DNASE1L3Q13609 305 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 FAM153CQ494X1 144 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 TRIM60Q495X7 471 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 RNASE12Q5GAN4 147 aaKnown RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 AARS2Q5JTZ9 985 aaKnown RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 ANKRD45Q5TZF3 282 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 ANKRD40Q6AI12 368 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 PNPLA1Q8N8W4 532 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 FAM71DQ8N9W8 422 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 AFG1LQ8WV93 481 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 OVCA2Q8WZ82 227 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 ZSCAN31Q96LW9 406 aaPredicted RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 SEPSECSQ9HD40 501 aaKnown RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 RRN3Q9NYV6 651 aa5.08□□□□□ -1.6
CHD9-215ENST00000565442 C19orf53Q9UNZ5 99 aaPredicted RBP5.08□□□□□ -1.6
CHD9-215ENST00000565442 CCDC187A0A096LP49 1063 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 EFCAB8A8MWE9 144 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 GCOM1H8Y6P7 765 aaPredicted RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 EXOC3O60645 756 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 PRAMEF2O60811 474 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 MYCLP12524 364 aaPredicted RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 MMP8P22894 467 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 THBS4P35443 961 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 IGHMBP2P38935 993 aaKnown RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 CYP4F2P78329 520 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 RAE1P78406 368 aaKnown RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 RNASELQ05823 741 aaKnown RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 CCDC15Q0P6D6 951 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 SRSF7Q16629 238 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHD9-215ENST00000565442 ADCK5Q3MIX3 580 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 GALNTL6Q49A17 601 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 ZNF569Q5MCW4 686 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 TTC22Q5TAA0 569 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 DENND2CQ68D51 928 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 MTHFD1LQ6UB35 978 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 C16orf89Q6UX73 402 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 SLC29A4Q7RTT9 530 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 C2CD5Q86YS7 1000 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 SFTPA1Q8IWL2 248 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 OR6Y1Q8NGX8 325 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 CPT1BQ92523 772 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 DPF1Q92782 380 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 GOLGA1Q92805 767 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 REXO5Q96IC2 774 aaKnown RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 MMS19Q96T76 1030 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 PAAF1Q9BRP4 392 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 THAP7Q9BT49 309 aaPredicted RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 CINPQ9BW66 212 aaPredicted RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 CIPCQ9C0C6 399 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 KCND3Q9UK17 655 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 FEM1BQ9UK73 627 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 RAB21Q9UL25 225 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 NFU1Q9UMS0 254 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 GTF2A1LQ9UNN4 478 aa5.07□□□□□ -1.6
CHD9-215ENST00000565442 UBE2J1Q9Y385 318 aaPredicted RBP5.07□□□□□ -1.6
CHD9-215ENST00000565442 LOC105369274A0A096LPK9 316 aa5.06□□□□□ -1.6
CHD9-215ENST00000565442 LOC102723532A0A0G2JNH3 316 aa5.06□□□□□ -1.6
CHD9-215ENST00000565442 GXYLT2A0PJZ3 443 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms