RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 PPP3CCP48454 512 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 AIF1P55008 147 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 USP46P62068 366 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 TWF1Q12792 350 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 TAF10Q12962 218 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 DAB2IPQ5VWQ8 1189 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 SYPL2Q5VXT5 272 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 MAP7D3Q8IWC1 876 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 RASGEF1CQ8N431 466 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 PGAP3Q96FM1 320 aaPredicted RBP17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 TRMT2BQ96GJ1 504 aaKnown RBP17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 DDIT4Q9NX09 232 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 IGSF9Q9P2J2 1179 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 FBXW11Q9UKB1 542 aa17.02■□□□□ 0.32
THUMPD1-203ENST00000565248 DENND4AQ7Z401 1863 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 LRRD1A4D1F6 860 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 FYNP06241 537 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 PYGMP11217 842 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 HDAC4P56524 1084 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 NME3Q13232 169 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 ZNF211Q13398 564 aaPredicted RBP17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 LONRF2Q1L5Z9 754 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 ARL13BQ3SXY8 428 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 SH3PXD2AQ5TCZ1 1133 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 DCAF12L1Q5VU92 463 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 LILRA6Q6PI73 481 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 SCD5Q86SK9 330 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 GPR149Q86SP6 731 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 PSTKQ8IV42 348 aaKnown RBP17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 ARFGAP1Q8N6T3 406 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 STKLD1Q8NE28 680 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 DQX1Q8TE96 717 aaKnown RBP17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 SLC22A17Q8WUG5 538 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 HSPH1Q92598 858 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 MYRFLQ96LU7 910 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 ZNF512Q96ME7 567 aaPredicted RBP17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 SERPINB11Q96P15 392 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 HINFPQ9BQA5 517 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 PLEKHA4Q9H4M7 779 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 KCNK12Q9HB15 430 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 TRPM5Q9NZQ8 1165 aa17.01■□□□□ 0.31
THUMPD1-203ENST00000565248 SYNJ2BP-COX16A0A087WUM0 186 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 MDM4O15151 490 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 FGGP02679 453 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 C8AP07357 584 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 TCF4P15884 667 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 KRT81Q14533 505 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 PDK2Q15119 407 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 ERMARDQ5T6L9 678 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 MSANTD2Q6P1R3 559 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 ZC3H14Q6PJT7 736 aaKnown RBP17■□□□□ 0.31
THUMPD1-203ENST00000565248 ZNF572Q7Z3I7 529 aaPredicted RBP17■□□□□ 0.31
THUMPD1-203ENST00000565248 RNF34Q969K3 372 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 PSMG2Q969U7 264 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 MS4A14Q96JA4 679 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17■□□□□ 0.312e-6■■■■□ 22.3
THUMPD1-203ENST00000565248 COX16Q9P0S2 106 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 WNT16Q9UBV4 365 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 DMXL1Q9Y485 3027 aa17■□□□□ 0.31
THUMPD1-203ENST00000565248 EP300Q09472 2414 aaPredicted RBP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 SPATA31D3P0C874 917 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 RARAP10276 462 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 RARGP13631 454 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 TFE3P19532 575 aaPredicted RBP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 IL1R2P27930 398 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 KPNA1P52294 538 aaPredicted RBP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 PUM1Q14671 1186 aaKnown RBP eCLIP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 PPP2R5EQ16537 467 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 SMTNL2Q2TAL5 461 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 PABPC1LQ4VXU2 614 aaKnown RBP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 EFHC2Q5JST6 749 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 PPM1LQ5SGD2 360 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 SPOCD1Q6ZMY3 1216 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 SPATA31D4Q6ZUB0 917 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 BNIPLQ7Z465 357 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 TAC4Q86UU9 113 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 FAM131BQ86XD5 332 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 KIAA2013Q8IYS2 634 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 HDAC7Q8WUI4 952 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 NTAN1Q96AB6 310 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 RNF25Q96BH1 459 aaPredicted RBP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 RMDN1Q96DB5 314 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 NMUR1Q9HB89 426 aa16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
THUMPD1-203ENST00000565248 CCDC188H7C350 402 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 KRIT1O00522 736 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 TJP3O95049 919 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 ZDHHC11BP0C7U3 371 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 SLC2A3P11169 496 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 HMGA1P17096 107 aaKnown RBP16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 KDELR1P24390 212 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 PTPN7P35236 360 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 CLCN4P51793 760 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 CDH6P55285 790 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 MTA1Q13330 715 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 ATP13A4Q4VNC1 1196 aa16.98■□□□□ 0.31
THUMPD1-203ENST00000565248 KCNT1Q5JUK3 1230 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms