RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PRKCHP24723 683 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 HOXD9P28356 352 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 HLA-FP30511 346 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 BCAT1P54687 386 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SLC8A3P57103 927 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 FKBP3Q00688 224 aaKnown RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 ADIGQ0VDE8 80 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SLC14A1Q13336 389 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 STARD3Q14849 445 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 EIF4HQ15056 248 aaKnown RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 GOLGA7BQ2TAP0 167 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 PLEKHG6Q3KR16 790 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SGO2Q562F6 1265 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SYCP2LQ5T4T6 812 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF658Q5TYW1 1059 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 BSPRYQ5W0U4 402 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 KIAA1324Q6UXG2 1013 aaKnown RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 RSRC2Q7L4I2 434 aaKnown RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 ANKS1BQ7Z6G8 1248 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 FMNL3Q8IVF7 1028 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 RGL4Q8IZJ4 473 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SCML4Q8N228 414 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 HDDC3Q8N4P3 179 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 C1orf216Q8TAB5 229 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 UBA3Q8TBC4 463 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 DDI1Q8WTU0 396 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 KCTD13Q8WZ19 329 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 TFAP2BQ92481 460 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SLC35C1Q96A29 364 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 CAMK1GQ96NX5 476 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 ZSWIM1Q9BR11 485 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 GPR174Q9BXC1 333 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 TMEM245Q9H330 911 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SFMBT1Q9UHJ3 866 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 KLK13Q9UKR3 277 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 STRIP2Q9ULQ0 834 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 HBS1LQ9Y450 684 aaKnown RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 NFE2L3Q9Y4A8 694 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 ATP6V1DQ9Y5K8 247 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 TRIM49BA6NDI0 452 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 RNF225M0QZC1 329 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 SH3BP5O60239 455 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 SYNCRIPO60506 623 aaKnown RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 TSPAN3O60637 253 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 CBFA2T3O75081 653 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 CYBBP04839 570 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 VDRP11473 427 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 GNSP15586 552 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 HARS2P49590 506 aaKnown RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 SGSHP51688 502 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 DAOAP59103 153 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 BNC1Q01954 994 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 BST2Q10589 180 aaKnown RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 GRIK2Q13002 908 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 CAMK2GQ13555 558 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 PTPRNQ16849 979 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 MPPE1Q53F39 396 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 DCAF17Q5H9S7 520 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 WDR45BQ5MNZ6 344 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 ADGRF1Q5T601 910 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 TCERG1LQ5VWI1 586 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 PMF1Q6P1K2 205 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 RAB44Q7Z6P3 723 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 ADIPOR2Q86V24 386 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 LMO3Q8TAP4 145 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 SLC35F5Q8WV83 523 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 UCMAQ8WVF2 138 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 EDEM1Q92611 657 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 PRCCQ92733 491 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 ERCC4Q92889 916 aaPredicted RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 SIPA1Q96FS4 1042 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 NUP58Q9BVL2 599 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 CIPCQ9C0C6 399 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 LRRC4Q9HBW1 653 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 ABCC13Q9NSE7 274 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 OLA1Q9NTK5 396 aaKnown RBP8.96□□□□□ -0.98
CAPN3-213ENST00000565173 RMND1Q9NWS8 449 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 SUSD2Q9UGT4 822 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 KIAA1257Q9ULG3 409 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 MSRB2Q9Y3D2 182 aa8.96□□□□□ -0.98
CAPN3-213ENST00000565173 CKAP5Q14008 2032 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 A0A1B0GTW7 788 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 TMEM8BA6NDV4 472 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 SRRM3A6NNA2 597 aaPredicted RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 H0Y626 953 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 PMM2O15305 246 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 MSI1O43347 362 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 TRIM16O95361 564 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 LATS1O95835 1130 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 CALCAP01258 141 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 IGLV3-27P01718 113 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 EPHX1P07099 455 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 SETSIPP0DME0 302 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 HLA-EP13747 358 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 LCP1P13796 627 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 OXTRP30559 389 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 FMO5P49326 533 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms