RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 AVPR2P30518 371 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 FLT3P36888 993 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 LRRC32Q14392 662 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 MPPE1Q53F39 396 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 ALKBH5Q6P6C2 394 aaKnown RBP16.6■□□□□ 0.25
RAB40C-208ENST00000564703 EMC1Q8N766 993 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 NAT16Q8N8M0 369 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 PJA1Q8NG27 643 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 CCDC26Q8TAB7 109 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 SLC39A13Q96H72 371 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 CFAP57Q96MR6 1250 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 LMAN1LQ9HAT1 526 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 MRPL47Q9HD33 250 aaKnown RBP16.6■□□□□ 0.25
RAB40C-208ENST00000564703 DEC1Q9P2X7 70 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 CNOT8Q9UFF9 292 aaKnown RBP16.6■□□□□ 0.25
RAB40C-208ENST00000564703 VCANP13611 3396 aa16.6■□□□□ 0.25
RAB40C-208ENST00000564703 KIF26AQ9ULI4 1882 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 A0A087X0T9 212 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 KCNU1A8MYU2 1149 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 HOXC11O43248 304 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 TSPAN3O60637 253 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 FAM228BP0C875 321 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 TYRP14679 529 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 GPD1P21695 349 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 DRD1P21728 446 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 RFC1P35251 1148 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 PITX1P78337 314 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 ATP11AP98196 1134 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 PPP2R5DQ14738 602 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 BRMS1LQ5PSV4 323 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 TXNDC11Q6PKC3 985 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 CCDC117Q8IWD4 279 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 BHMTQ93088 406 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 NT5C3BQ969T7 300 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 ZNF653Q96CK0 615 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 PGAP3Q96FM1 320 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 PNKPQ96T60 521 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 TBCBQ99426 244 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 IRX2Q9BZI1 471 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 MYO1AQ9UBC5 1043 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 STOML2Q9UJZ1 356 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 MTF2Q9Y483 593 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-208ENST00000564703 SCINQ9Y6U3 715 aa16.59■□□□□ 0.25
RAB40C-208ENST00000564703 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 PI15O43692 258 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 APODP05090 189 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 DCNP07585 359 aaKnown RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 TARSP26639 723 aaKnown RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 RDXP35241 583 aaKnown RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 EIF2DP41214 584 aaKnown RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 MAGEA9P43362 315 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 VCPP55072 806 aaKnown RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 MAMLD1Q13495 774 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 SLC18A3Q16572 532 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 FBXO43Q4G163 708 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 JOSD2Q8TAC2 188 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 CHFRQ96EP1 664 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 NHEJ1Q9H9Q4 299 aaPredicted RBP16.58■□□□□ 0.24
RAB40C-208ENST00000564703 PLK2Q9NYY3 685 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 MARK1Q9P0L2 795 aa16.58■□□□□ 0.24
RAB40C-208ENST00000564703 GOLGA6L7A0A1B0GV03 622 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 TBC1D3BA6NDS4 549 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 GJB6O95452 261 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 OPRD1P41143 372 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 PTPN9P43378 593 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 SLC6A11P48066 632 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 CXCR3P49682 368 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 GFPT1Q06210 699 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-208ENST00000564703 EIF4EBP2Q13542 120 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-208ENST00000564703 CDO1Q16878 200 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 ARL13BQ3SXY8 428 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 CCDC14Q49A88 953 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 TMEM196Q5HYL7 178 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 ACBD5Q5T8D3 534 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-208ENST00000564703 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
RAB40C-208ENST00000564703 PLEKHA7Q6IQ23 1121 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 RFWD3Q6PCD5 774 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 FAM217AQ8IXS0 508 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 SYNPOQ8N3V7 929 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 TC2NQ8N9U0 490 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 MCEEQ96PE7 176 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 CHP1Q99653 195 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 TKTL2Q9H0I9 626 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 ARHGEF4Q9NR80 690 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 PIGVQ9NUD9 493 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 DNAJC17Q9NVM6 304 aaKnown RBP16.57■□□□□ 0.24
RAB40C-208ENST00000564703 IMPACTQ9P2X3 320 aa16.57■□□□□ 0.24
RAB40C-208ENST00000564703 TCRBV5S1A1TA0A578 114 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 GOLGA6L3A6NEY3 463 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 SHISA7A6NL88 538 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 F5H5T6 163 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 TULP3O75386 442 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 RNF8O76064 485 aa16.56■□□□□ 0.24
RAB40C-208ENST00000564703 CHRNB1P11230 501 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms